Orkun Akin, Ph.D.


Work Titles
UCLA Assistant Professor, Neurobiology Member, Cell & Developmental Biology GPB Home Area Member, Molecular, Cellular & Integrative Physiology GPB Home Area Member, Neuroscience GPB Home Area
Education:
Degrees:
Ph.D.

Contact Information:

Email Address:

OAkin@mednet.ucla.edu


Website:

Lab Website

Research Interest:

Stimulus-independent neuronal activity in the developing brain

What makes brains and neurons so compelling to look at is their astonishingly intricate organization. The grand challenge of developmental neurobiology is to understand how the information in the genome is used to build such a stereotyped, complex structure. This challenge has been taken up in many model organisms and for different stages of neuronal development: profileration, differentiation, axon guidance, and synapse formation. In the fruit fly, the workhorse of classic genetic analysis, we discovered a new epoch in brain development that was previously unknown for invertebrate biology. Using 2-photon imaging, we found that soon after most axon guidance events are completed and co-incident with the onset of synapse formation, neurons in the developing brain begin to show coordinated, periodic bursts of electrical activity. In the visual system, this activity is independent of sensory stimulation (i.e. the fly cannot see yet), lasts for two days until the adult emerges from its pupa, and is cell-type specific. That is, the pattern of activity is distinct for each defined cell type but similar for neurons that are synaptic partners in the adult. Notably, stimulus-independent neuronal activity in the developing vertebrate brain has been observed and studied in the past three decades; the discovery of a comparable phenomenon in an invertebrate suggests that this is a general feature of the assembly of complex brains. We are now asking where the activity is coming from, how it is organized and coordinated across the brain, and how it is contributing to brain development. The remarkable toolkit available in the fly visual system, from the complete connectome to the ability to monitor and manipulate individual neurons, provides an extraordinary opportunity address these questions. 

Publications:

A selected list of publications:

Bieling Peter, Hansen Scott D, Akin Orkun, Li Tai-De, Hayden Carl C, Fletcher Daniel A, Mullins R Dyche   WH2 and proline-rich domains of WASP-family proteins collaborate to accelerate actin filament elongation The EMBO journal, 2018; 37(1): 102-121.
Akin Orkun, Zipursky S Lawrence   Frazzled promotes growth cone attachment at the source of a Netrin gradient in the eLife, 2016; 5(1): 102-121.
Tadros Wael, Xu Shuwa, Akin Orkun, Yi Caroline H, Shin Grace Ji-Eun, Millard S Sean, Zipursky S Lawrence   Dscam Proteins Direct Dendritic Targeting through Adhesion Neuron, 2016; 89(3): 480-93.
Pecot Matthew Y, Chen Yi, Akin Orkun, Chen Zhenqing, Tsui C Y Kimberly, Zipursky S Lawrence   Sequential axon-derived signals couple target survival and layer specificity in the Drosophila visual system Neuron, 2014; 82(2): 320-33.
Chen Yi, Akin Orkun, Nern Aljoscha, Tsui C Y Kimberly, Pecot Matthew Y, Zipursky S Lawrence   Cell-type-specific labeling of synapses in vivo through synaptic tagging with recombination Neuron, 2014; 81(2): 280-93.
Akin Orkun, Zipursky S Lawrence   The shape of things to come Cell, 2014; 156(1-2): 13-4.
Dayel Mark J, Akin Orkun, Landeryou Mark, Risca Viviana, Mogilner Alex, Mullins R Dyche   In silico reconstitution of actin-based symmetry breaking and motility PLoS biology, 2009; 7(9): e1000201.
Akin Orkun, Mullins R Dyche   Capping protein increases the rate of actin-based motility by promoting filament nucleation by the Arp2/3 complex Cell, 2008; 133(5): 841-51.

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