Jonathan Braun, M.D., Ph.D.

A Short Biography:

Jonathan Braun, M.D., Ph.D., is a physician-researcher devoted to the roles of the immune system in resistance and susceptibility to inflammatory bowel disease and cancer. He is a professor and chair of Pathology and Lab Medicine at the David Geffen School of Medicine at UCLA. A native of Cleveland, Ohio, Dr. Braun was raised in Los Angeles, where he focused on violin performance. He was an undergraduate at Stanford University (BS, chemistry and biology), and did his MD and PhD studies at Harvard Medical School with Emil Unanue. After residency in Pathology at Brigham and Women’s Hospital, and a postdoctoral fellowship with David Baltimore at the Whitehead Institute, he joined the faculty at the UCLA School of Medicine in 1985. Through an integrated approach of molecular microbial ecology and metaproteomic and metabolite analysis, and human genetics, his research centers on the biology of mucosal interaction of host immunity with the local microbial community, and its impact on chronic mucosal inflammatory disease and cancer. He has published more than 140 primary research studies, 14 issued patents, and co-founded three biopharma companies. His recent national service includes Chair of the National Scientific Advisory Committee of the Crohn’s and Colitis Foundation, and President of the Federation of Clinical Immunology Societies. He still plays violin when possible.

Work Titles
CTSI Member, Internal Advisory Board Member, CTSI Member, Workforce Development
California NanoSystems Institute Member, California NanoSystems Institute
UCLA Chair, Professor, Pathology and Laboratory Medicine Co-Director, Tumor Immunology Program at the Jonsson Comprehensive Cancer Center (JCCC) Faculty, Cellular and Molecular Pathology PhD Program
M.D., Harvard Medical School, Boston, Massachusetts, 1975 - 1981
Ph.D., Harvard Medical School, 1980 -
B.S., Stanford University, 1971 - 1975
1984 - 1985 Whitehead Institute, M.I.T, Cambridge, MA
1981 - 1981 Brigham & Women's Hospital
1981 - 1985 Brigham and Women's Hospital, Boston, MA

Contact Information:

Office Phone Number:

(310) 794-7953

Laboratory Address:

4-525 MRL

Work Address:

MC: 173216

Detailed Biography:

Jonathan Braun, M.D., Ph.D., is Professor of Pathology and Laboratory Medicine, and Molecular and Medical Pharmacology, at the David Geffen School of Medicine at UCLA. He is the Chair of the Department of Pathology and Laboratory Medicine and co-Director of Tumor Immunology at the Jonsson Comprehensive Cancer Center. A native of Cleveland, Ohio, Dr. Braun was raised in Los Angeles, where he studied violin in the community and modern western history in the public schools. An undergraduate at Stanford University, he received his bachelor of science in chemistry and biology in 1975. He pursued medical studies and doctoral research at Harvard Medical School and in the laboratory of Emil Unanue; he received his M.D.-PhD. in 1981. After residency in Pathology at Brigham and Women's Hospital, and a postdoctoral fellowship with David Baltimore at the Whitehead Institute, he joined the faculty at the UCLA School of Medicine in 1985. His recent organizational leadership service includes Chairman of the National Scientific Advisory Board of the Crohn's and Colitis Foundation, President of the Clinical Immunology Society, and President of the Federation of Clinical Immunology Societies (FOCIS); he presently serves on the editorial boards of Gastroenterology, Inflammatory Bowel Diseases and Clinical Immunology. At UCLA, he directs the clinical programs in Pathology and Laboratory Medicine of UCLA Healthcare, and was a recent Director of the UCLA Clinical Translational Science Institute.


A selected list of publications:

Qin Yu, Takahashi Masamichi, Sheets Kristopher, Soto Horacio, Tsui Jessica, Pelargos Panayiotis, Antonios Joseph P, Kasahara Noriyuki, Yang Isaac, Prins Robert M, Braun Jonathan, Gordon Lynn K, Wadehra Madhuri   Epithelial membrane protein-2 (EMP2) promotes angiogenesis in glioblastoma multiforme Journal of neuro-oncology, 2017; .
Jacobs Jonathan P, Lin Lin, Goudarzi Maryam, Ruegger Paul, McGovern Dermot P B, Fornace Albert J, Borneman James, Xia Lijun, Braun Jonathan   Microbial, metabolomic, and immunologic dynamics in a relapsing genetic mouse model of colitis induced by T-synthase deficiency Gut microbes, 2017; 8(1): 1-16.
Yusung Susy, McGovern Dermot, Lin Lin, Hommes Daniel, Lagishetty Venu, Braun Jonathan   NK cells are biologic and biochemical targets of 6-mercaptopurine in Crohn's disease patients Clinical immunology (Orlando, Fla.), 2017; 175(2): 82-90.
Jacobs Jonathan P, Goudarzi Maryam, Singh Namita, Tong Maomeng, McHardy Ian H, Ruegger Paul, Asadourian Miro, Moon Bo-Hyun, Ayson Allyson, Borneman James, McGovern Dermot P B, Fornace Albert J, Braun Jonathan, Dubinsky Marla   A Disease-Associated Microbial and Metabolomics State in Relatives of Pediatric Inflammatory Bowel Disease Patients Cellular and molecular gastroenterology and hepatology, 2016; 2(6): 750-766.
Li Dalin, Achkar Jean-Paul, Haritunians Talin, Jacobs Jonathan P, Hui Ken Y, D'Amato Mauro, Brand Stephan, Radford-Smith Graham, Halfvarson Jonas, Niess Jan-Hendrik, Kugathasan Subra, Büning Carsten, Schumm L Philip, Klei Lambertus, Ananthakrishnan Ashwin, Aumais Guy, Baidoo Leonard, Dubinsky Marla, Fiocchi Claudio, Glas Jürgen, Milgrom Raquel, Proctor Deborah D, Regueiro Miguel, Simms Lisa A, Stempak Joanne M, Targan Stephan R, Törkvist Leif, Sharma Yashoda, Devlin Bernie, Borneman James, Hakonarson Hakon, Xavier Ramnik J, Daly Mark, Brant Steven R, Rioux John D, Silverberg Mark S, Cho Judy H, Braun Jonathan, McGovern Dermot P B, Duerr Richard H   A Pleiotropic Missense Variant in SLC39A8 Is Associated With Crohn's Disease and Human Gut Microbiome Composition Gastroenterology, 2016; 151(4): 724-32.
Goudarzi Maryam, Mak Tytus D, Jacobs Jonathan P, Moon Bo-Hyun, Strawn Steven J, Braun Jonathan, Brenner David J, Fornace Albert J, Li Heng-Hong   An Integrated Multi-Omic Approach to Assess Radiation Injury on the Host-Microbiome Axis Radiation research, 2016; 186(3): 219-34.
Volkmann Elizabeth R, Chang Yu-Ling, Barroso Nashla, Furst Daniel E, Clements Philip J, Gorn Alan H, Roth Bennett E, Conklin Jeffrey L, Getzug Terri, Borneman James, McGovern Dermot P B, Tong Maomeng, Jacobs Jonathan P, Braun Jonathan   Association of Systemic Sclerosis With a Unique Colonic Microbial Consortium Arthritis & rheumatology (Hoboken, N.J.), 2016; 68(6): 1483-92.
Louis David N, Feldman Michael, Carter Alexis B, Dighe Anand S, Pfeifer John D, Bry Lynn, Almeida Jonas S, Saltz Joel, Braun Jonathan, Tomaszewski John E, Gilbertson John R, Sinard John H, Gerber Georg K, Galli Stephen J, Golden Jeffrey A, Becich Michael J   Computational Pathology: A Path Ahead Archives of pathology & laboratory medicine, 2016; 140(1): 41-50.
Bergstrom Kirk, Liu Xiaowei, Zhao Yiming, Gao Nan, Wu Qian, Song Kai, Cui Yi, Li Yun, McDaniel J Michael, McGee Samuel, Chen Weichang, Huycke Mark M, Houchen Courtney W, Zenewicz Lauren A, West Christopher M, Chen Hong, Braun Jonathan, Fu Jianxin, Xia Lijun   Defective Intestinal Mucin-Type O-Glycosylation Causes Spontaneous Colitis-Associated Cancer in Mice Gastroenterology, 2016; 151(1): 152-164.e11.
Li Xiaoxiao, LeBlanc James, Elashoff David, McHardy Ian, Tong Maomeng, Roth Bennett, Ippoliti Andrew, Barron Gildardo, McGovern Dermot, McDonald Keely, Newberry Rodney, Graeber Thomas, Horvath Steve, Goodglick Lee, Braun Jonathan   Microgeographic Proteomic Networks of the Human Colonic Mucosa and Their Association With Inflammatory Bowel Disease Cellular and molecular gastroenterology and hepatology, 2016; 2(5): 567-583.
Liu Zhenqiu, Sun Fengzhu, Braun Jonathan, McGovern Dermot P B, Piantadosi Steven   Multilevel regularized regression for simultaneous taxa selection and network construction with metagenomic count data Bioinformatics (Oxford, England), 2015; 31(7): 1067-74.
Horvath Steve, Mah Vei, Lu Ake T, Woo Jennifer S, Choi Oi-Wa, Jasinska Anna J, Riancho José A, Tung Spencer, Coles Natalie S, Braun Jonathan, Vinters Harry V, Coles L Stephen   The cerebellum ages slowly according to the epigenetic clock Aging, 2015; 7(5): 294-306.
Moriceau Gatien, Hugo Willy, Hong Aayoung, Shi Hubing, Kong Xiangju, Yu Clarissa C, Koya Richard C, Samatar Ahmed A, Khanlou Negar, Braun Jonathan, Ruchalski Kathleen, Seifert Heike, Larkin James, Dahlman Kimberly B, Johnson Douglas B, Algazi Alain, Sosman Jeffrey A, Ribas Antoni, Lo Roger S   Tunable-combinatorial mechanisms of acquired resistance limit the efficacy of BRAF/MEK cotargeting but result in melanoma drug addiction Cancer cell, 2015; 27(2): 240-56.
Qin Yu, Fu Maoyong, Takahashi Masamichi, Iwanami Akio, Kuga Daisuke, Rao Rajiv G, Sudhakar Deepthi, Huang Tiffany, Kiyohara Meagan, Torres Kathleen, Dillard Christen, Inagaki Akihito, Kasahara Noriyuki, Goodglick Lee, Braun Jonathan, Mischel Paul S, Gordon Lynn K, Wadehra Madhuri   Epithelial membrane protein-2 (EMP2) activates Src protein and is a novel therapeutic target for glioblastoma The Journal of biological chemistry, 2014; 289(20): 13974-85.
Jacobs Jonathan, Braun Jonathan   Host genes and their effect on the intestinal microbiome garden Genome medicine, 2014; 6(12): 119.
Lin Lin, Ma Chao, Wei Bo, Aziz Najib, Rajalingam Raja, Yusung Susy, Erlich Henry A, Trachtenberg Elizabeth A, Targan Stephan R, McGovern Dermot P B, Heath James R, Braun Jonathan   Human NK cells licensed by killer Ig receptor genes have an altered cytokine program that modifies CD4+ T cell function Journal of immunology (Baltimore, Md. : 1950), 2014; 193(2): 940-9.
Jacobs Jonathan P, Braun Jonathan   Immune and genetic gardening of the intestinal microbiome FEBS letters, 2014; 588(22): 4102-11.
Ruegger Paul M, Clark Robin T, Weger John R, Braun Jonathan, Borneman James   Improved resolution of bacteria by high throughput sequence analysis of the rRNA internal transcribed spacer Journal of microbiological methods, 2014; 105(11): 82-7.
Ashki Negin, Chan Ann M, Qin Yu, Wang Wei, Kiyohara Meagan, Lin Lin, Braun Jonathan, Wadehra Madhuri, Gordon Lynn K   Peroxynitrite upregulates angiogenic factors VEGF-A, BFGF, and HIF-1α in human corneal limbal epithelial cells Investigative ophthalmology & visual science, 2014; 55(3): 1637-46.
Fu Maoyong, Maresh Erin L, Helguera Gustavo F, Kiyohara Meagan, Qin Yu, Ashki Negin, Daniels-Wells Tracy R, Aziz Najib, Gordon Lynn K, Braun Jonathan, Elshimali Yahya, Soslow Robert A, Penichet Manuel L, Goodglick Lee, Wadehra Madhuri   Rationale and preclinical efficacy of a novel anti-EMP2 antibody for the treatment of invasive breast cancer Molecular cancer therapeutics, 2014; 13(4): 902-15.
Tong Maomeng, McHardy Ian, Ruegger Paul, Goudarzi Maryam, Kashyap Purna C, Haritunians Talin, Li Xiaoxiao, Graeber Thomas G, Schwager Emma, Huttenhower Curtis, Fornace Albert J, Sonnenburg Justin L, McGovern Dermot P B, Borneman James, Braun Jonathan   Reprograming of gut microbiome energy metabolism by the FUT2 Crohn's disease risk polymorphism The ISME journal, 2014; 8(11): 2193-206.
Tong Maomeng, Jacobs Jonathan P, McHardy Ian H, Braun Jonathan   Sampling of intestinal microbiota and targeted amplification of bacterial 16S rRNA genes for microbial ecologic analysis Current protocols in immunology, 2014; 107(22): 7.41.1-11.
Tong Maomeng, Li Xiaoxiao, Wegener Parfrey Laura, Roth Bennett, Ippoliti Andrew, Wei Bo, Borneman James, McGovern Dermot P B, Frank Daniel N, Li Ellen, Horvath Steve, Knight Rob, Braun Jonathan   A modular organization of the human intestinal mucosal microbiota and its association with inflammatory bowel disease PloS one, 2013; 8(11): e80702.
Morales Shawn A, Telander David G, Leon Deanna, Forward Krisztina, Braun Jonathan, Wadehra Madhuri, Gordon Lynn K   Epithelial membrane protein 2 controls VEGF expression in ARPE-19 cells Investigative ophthalmology & visual science, 2013; 54(3): 2367-72.
McHardy Ian H, Li Xiaoxiao, Tong Maomeng, Ruegger Paul, Jacobs Jonathan, Borneman James, Anton Peter, Braun Jonathan   HIV Infection is associated with compositional and functional shifts in the rectal mucosal microbiota Microbiome, 2013; 1(1): 26.
McHardy Ian H, Goudarzi Maryam, Tong Maomeng, Ruegger Paul M, Schwager Emma, Weger John R, Graeber Thomas G, Sonnenburg Justin L, Horvath Steve, Huttenhower Curtis, McGovern Dermot Pb, Fornace Albert J, Borneman James, Braun Jonathan   Integrative analysis of the microbiome and metabolome of the human intestinal mucosal surface reveals exquisite inter-relationships Microbiome, 2013; 1(1): 17.
Yamamoto Mitsuko L, Maier Irene, Dang Angeline Tilly, Berry David, Liu Jared, Ruegger Paul M, Yang Jiue-In, Soto Phillip A, Presley Laura L, Reliene Ramune, Westbrook Aya M, Wei Bo, Loy Alexander, Chang Christopher, Braun Jonathan, Borneman James, Schiestl Robert H   Intestinal bacteria modify lymphoma incidence and latency by affecting systemic inflammatory state, oxidative stress, and leukocyte genotoxicity Cancer research, 2013; 73(14): 4222-32.
Liu Lihui, Chen Hui, Brecher Matthew B, Li Zhong, Wei Bo, Nandi Bisweswar, Zhang Jing, Ling Hua, Winslow Gary, Braun Jonathan, Li Hongmin   Pfit is a structurally novel Crohn's disease-associated superantigen PLoS pathogens, 2013; 9(12): e1003837.
Morales Shawn A, Telander David G, Mareninov Sergey, Nagy Agnes, Wadehra Madhuri, Braun Jonathan, Gordon Lynn K   Anti-EMP2 diabody blocks epithelial membrane protein 2 (EMP2) and FAK mediated collagen gel contraction in ARPE-19 cells Experimental eye research, 2012; 102: 10-6.
Presley Laura L, Ye Jingxiao, Li Xiaoxiao, Leblanc James, Zhang Zhanpan, Ruegger Paul M, Allard Jeff, McGovern Dermot, Ippoliti Andrew, Roth Bennett, Cui Xinping, Jeske Daniel R, Elashoff David, Goodglick Lee, Braun Jonathan, Borneman James   Host-microbe relationships in inflammatory bowel disease detected by bacterial and metaproteomic analysis of the mucosal-luminal interface Inflammatory bowel diseases, 2012; 18(3): 409-17.
Ruegger Paul M, Bent Elizabeth, Li Wei, Jeske Daniel R, Cui Xinping, Braun Jonathan, Jiang Tao, Borneman James   Improving oligonucleotide fingerprinting of rRNA genes by implementation of polony microarray technology Journal of microbiological methods, 2012; 90(3): 235-40.
Sachar David B, Jewell Derek, Gasche Christoph, Braun Jonathan   Inflammatory bowel disease International journal of inflammation, 2012; 2012: 341052.
Wingender Gerhard, Stepniak Dariusz, Krebs Philippe, Lin Lin, McBride Sara, Wei Bo, Braun Jonathan, Mazmanian Sarkis K, Kronenberg Mitchell   Intestinal microbes affect phenotypes and functions of invariant natural killer T cells in mice Gastroenterology, 2012; 143(2): 418-28.
Sham Caroline W, Chan Ann M, Kwong Jacky M K, Caprioli Joseph, Nusinowitz Steven, Chen Bryan, Lee Janice G, Gandhi Nishant M, Francisco Loise M, Sharpe Arlene H, Chen Ling, Braun Jonathan, Gordon Lynn K   Neuronal Programmed Cell Death-1 Ligand Expression Regulates Retinal Ganglion Cell Number in Neonatal and Adult Mice Journal of neuro-ophthalmology : the official journal of the North American Neuro-Ophthalmology Society, 2012; 32(3): 227-237.
Fu Maoyong, Brewer Sarah, Olafsen Tove, Wu Anna M, Gordon Lynn K, Said Jonathan, Braun Jonathan, Wadehra Madhuri   Positron Emission Tomography Imaging of Endometrial Cancer Using Engineered Anti-EMP2 Antibody Fragments Molecular imaging and biology : MIB : the official publication of the Academy of Molecular Imaging, 2012; 143(2): .
Jounai Kenta, Ikado Kumiko, Sugimura Tetsu, Ano Yasuhisa, Braun Jonathan, Fujiwara Daisuke   Spherical lactic acid bacteria activate plasmacytoid dendritic cells immunomodulatory function via TLR9-dependent crosstalk with myeloid dendritic cells PloS one, 2012; 7(4): e32588.
Westbrook Aya M, Wei Bo, Hacke Katrin, Xia Menghang, Braun Jonathan, Schiestl Robert H   The role of tumour necrosis factor-α and tumour necrosis factor receptor signalling in inflammation-associated systemic genotoxicity Mutagenesis, 2012; 27(1): 77-86.
Li Xiaoxiao, LeBlanc James, Truong Allison, Vuthoori Ravi, Chen Sharon S, Lustgarten Jonathan L, Roth Bennett, Allard Jeff, Ippoliti Andrew, Presley Laura L, Borneman James, Bigbee William L, Gopalakrishnan Vanathi, Graeber Thomas G, Elashoff David, Braun Jonathan, Goodglick Lee   A metaproteomic approach to study human-microbial ecosystems at the mucosal luminal interface PloS one, 2011; 6(11): e26542.
Lin Lin, Braun Jonathan   Another earth: innate lymphoid cells and intestinal inflammation Gastroenterology, 2011; 141(5): 1542-4.
Fu Maoyong, Rao Rajiv, Sudhakar Deepthi, Hogue Claire P, Rutta Zach, Morales Shawn, Gordon Lynn K, Braun Jonathan, Goodglick Lee, Wadehra Madhuri   Epithelial membrane protein-2 promotes endometrial tumor formation through activation of FAK and Src PloS one, 2011; 6(5): e19945.
Westbrook Aya M, Wei Bo, Braun Jonathan, Schiestl Robert H   Intestinal inflammation induces genotoxicity to extraintestinal tissues and cell types in mice International journal of cancer. Journal international du cancer, 2011; 129(8): 1815-25.
Fu Jianxin, Wei Bo, Wen Tao, Johansson Malin E V, Liu Xiaowei, Bradford Emily, Thomsson Kristina A, McGee Samuel, Mansour Lilah, Tong Maomeng, McDaniel J Michael, Sferra Thomas J, Turner Jerrold R, Chen Hong, Hansson Gunnar C, Braun Jonathan, Xia Lijun   Loss of intestinal core 1-derived O-glycans causes spontaneous colitis in mice The Journal of clinical investigation, 2011; 121(4): 1657-66.
Gasco Jaime, Braun Jonathan D, McCutcheon Ian E, Black Peter M   Neurosurgery certification in member societies of the World Federation of Neurosurgical Societies: Asia World neurosurgery, 2011; 75(3-4): 325-34.
Rao Rajiv G, Sudhakar Deepthi, Hogue Claire P, Amici Stephanie, Gordon Lynn K, Braun Jonathan, Notterpek Lucia, Goodglick Lee, Wadehra Madhuri   Peripheral myelin protein-22 (PMP22) modulates alpha 6 integrin expression in the human endometrium Reproductive biology and endocrinology : RB&E, 2011; 9: 56.
Kumar Anjuli R, Li Xiaoxiao, Leblanc James F, Farmer Douglas G, Elashoff David, Braun Jonathan, Ziring David   Proteomic analysis reveals innate immune activity in intestinal transplant dysfunction Transplantation, 2011; 92(1): 112-9.
Li Xiaoxiao, Braun Jonathan, Wei Bo   Regulatory B cells in autoimmune diseases and mucosal immune homeostasis Autoimmunity, 2011; 44(1): 58-68.
Morales Shawn A, Telander David, Notterpek Lucia, Wadehra Madhuri, Braun Jonathan, Gordon Lynn K   Rewiring integrin-mediated signaling and cellular response with the peripheral myelin protein 22 and epithelial membrane protein 2 components of the tetraspan web Investigative ophthalmology & visual science, 2011; 52(8): 5465-72.
Fujiwara Daisuke, Chen Ling, Wei Bo, Braun Jonathan   Small intestine CD11c+ CD8+ T cells suppress CD4+ T cell-induced immune colitis American journal of physiology. Gastrointestinal and liver physiology, 2011; 300(6): G939-47.
Maecker Holden T, McCoy J Philip, McCoy J Philip, Amos Michael, Elliott John, Gaigalas Adolfas, Wang Lili, Aranda Richard, Banchereau Jacques, Boshoff Chris, Braun Jonathan, Korin Yael, Reed Elaine, Cho Judy, Hafler David, Davis Mark, Fathman C Garrison, Robinson William, Denny Thomas, Weinhold Kent, Desai Bela, Diamond Betty, Gregersen Peter, Di Meglio Paola, DiMeglio Paola, Nestle Frank O, Nestle Frank, Peakman Mark, Villanova Federica, Villnova Federica, Ferbas John, Field Elizabeth, Kantor Aaron, Kawabata Thomas, Komocsar Wendy, Lotze Michael, Nepom Jerry, Ochs Hans, O'Lone Raegan, Phippard Deborah, Plevy Scott, Rich Stephen, Roederer Mario, Rotrosen Dan, Yeh Jung-Hua   A model for harmonizing flow cytometry in clinical trials Nature immunology, 2010; 11(11): 975-8.
Presley Laura L, Wei Bo, Braun Jonathan, Borneman James   Bacteria associated with immunoregulatory cells in mice Applied and environmental microbiology, 2010; 76(3): 936-41.
Wei Bo, Wingender Gerhard, Fujiwara Daisuke, Chen Diana YuHui, McPherson Michael, Brewer Sarah, Borneman James, Kronenberg Mitchell, Braun Jonathan   Commensal microbiota and CD8+ T cells shape the formation of invariant NKT cells Journal of immunology (Baltimore, Md. : 1950), 2010; 184(3): 1218-26.
Habeeb Omar, Goodglick Lee, Soslow Robert A, Rao Rajiv G, Gordon Lynn K, Schirripa Osvaldo, Horvath Steve, Braun Jonathan, Seligson David B, Wadehra Madhuri   Epithelial membrane protein-2 expression is an early predictor of endometrial cancer development Cancer, 2010; 116(20): 4718-26.
Fu Maoyong, Maresh Erin L, Soslow Robert A, Alavi Mohammad, Mah Vei, Zhou Qin, Iasonos Alexia, Goodglick Lee, Gordon Lynn K, Braun Jonathan, Wadehra Madhuri   Epithelial membrane protein-2 is a novel therapeutic target in ovarian cancer Clinical cancer research : an official journal of the American Association for Cancer Research, 2010; 16(15): 3954-63.
Brewer Sarah, Nair-Gill Evan, Wei Bo, Chen Ling, Li Xiaoxiao, Riedinger Mireille, Campbell Dean O, Wiltzius Stephanie, Satyamurthy Nagichettiar, Phelps Michael E, Radu Caius, Witte Owen N, Braun Jonathan   Epithelial uptake of [18F]1-(2'-deoxy-2'-arabinofuranosyl) cytosine indicates intestinal inflammation in mice Gastroenterology, 2010; 138(4): 1266-75.
Moniz Raymond J, Chan Ann M, Gordon Lynn K, Braun Jonathan, Arditi Moshe, Kelly Kathleen A   Plasmacytoid dendritic cells modulate nonprotective T-cell responses to genital infection by Chlamydia muridarum FEMS immunology and medical microbiology, 2010; 58(3): 397-404.
Li X, Braun J, Wei B   Regulatory B cells in autoimmune diseases and mucosal immune homeostasis Autoimmunity, 2010; 44(1): 58-68.
Shimazaki Kaori, Chan Ann M, Moniz Raymond J, Wadehra Madhuri, Nagy Agnes, Coulam Catherine P, Mareninov Sergey, Lepin Eric M, Wu Anna M, Kelly Kathleen A, Braun Jonathan, Gordon Lynn K   Blockade of epithelial membrane protein 2 (EMP2) abrogates infection of Chlamydia muridarum murine genital infection model FEMS immunology and medical microbiology, 2009; 55(2): 240-9.
Chen Ling, Pai Vicky, Levinson Ralph, Sharpe Arlene H, Freeman Gordon J, Braun Jonathan, Gordon Lynn K   Constitutive neuronal expression of the immune regulator, programmed death 1 (PD-1), identified during experimental autoimmune uveitis Ocular immunology and inflammation, 2009; 17(1): 47-55.
Morales Shawn A, Mareninov Sergey, Wadehra Madhuri, Zhang Lily, Goodglick Lee, Braun Jonathan, Gordon Lynn K   FAK activation and the role of epithelial membrane protein 2 (EMP2) in collagen gel contraction Investigative ophthalmology & visual science, 2009; 50(1): 462-9.
Ashorn Sara, Honkanen Teemu, Kolho Kaija-Leena, Ashorn Merja, Välineva Tuuli, Wei Bo, Braun Jonathan, Rantala Immo, Luukkaala Tiina, Iltanen Sari   Fecal calprotectin levels and serological responses to microbial antigens among children and adolescents with inflammatory bowel disease Inflammatory bowel diseases, 2009; 15(2): 199-205.
Morales Shawn A, Mareninov Sergey, Coulam Paige, Wadehra Madhuri, Goodglick Lee, Braun Jonathan, Gordon Lynn K   Functional consequences of interactions between FAK and epithelial membrane protein 2 (EMP2) Investigative ophthalmology & visual science, 2009; 50(10): 4949-56.
Westbrook Aya M, Wei Bo, Braun Jonathan, Schiestl Robert H   Intestinal mucosal inflammation leads to systemic genotoxicity in mice Cancer research, 2009; 69(11): 4827-34.
Westbrook Aya M, Wei Bo, Braun Jonathan, Schiestl Robert H   More damaging than we think: systemic effects of intestinal inflammation Cell cycle (Georgetown, Tex.), 2009; 8(16): 2482-3.
Kenanova Vania, Barat Bhaswati, Olafsen Tove, Chatziioannou Arion, Herschman Harvey R, Braun Jonathan, Wu Anna M   Recombinant carcinoembryonic antigen as a reporter gene for molecular imaging European journal of nuclear medicine and molecular imaging, 2009; 36(1): 104-14.
Chen Ling, Sham Caroline W, Chan Ann M, Francisco Loise M, Wu Yin, Mareninov Sergey, Sharpe Arlene H, Freeman Gordon J, Yang Xian-Jie, Braun Jonathan, Gordon Lynn K   Role of the immune modulator programmed cell death-1 during development and apoptosis of mouse retinal ganglion cells Investigative ophthalmology & visual science, 2009; 50(10): 4941-8.
Ashorn Sara, Välineva Tuuli, Kaukinen Katri, Ashorn Merja, Braun Jonathan, Raukola Hanna, Rantala Immo, Collin Pekka, Mäki Markku, Luukkaala Tiina, Iltanen Sari   Serological responses to microbial antigens in celiac disease patients during a gluten-free diet Journal of clinical immunology, 2009; 29(2): 190-5.
Ye Jingxiao, Lee Jimmy W, Presley Laura L, Bent Elizabeth, Wei Bo, Braun Jonathan, Schiller Neal L, Straus Daniel S, Borneman James   Bacteria and bacterial rRNA genes associated with the development of colitis in IL-10(-/-) mice Inflamm. Bowel Dis, 2008; 14(8): 1041-50.
McPherson M, Wei B, Turovskaya O, Fujiwara D, Brewer S, Braun J   Colitis immunoregulation by CD8+ T cell requires T cell cytotoxicity and B cell peptide antigen presentation Am. J. Physiol. Gastrointest. Liver Physiol, 2008; 64(2): .
Underhill David, Braun Jonathan   Current understanding of fungal microflora in inflammatory bowel disease pathogenesis Inflamm. Bowel Dis, 2008; 14(8): 1147-53.
Shimazaki Kaori, Lepin Eric J, Wei Bo, Nagy Agnes K, Coulam Catherine P, Mareninov Sergey, Fu Maoyong, Wu Anna M, Marks James D, Braun Jonathan, Gordon Lynn K, Wadehra Madhuri   Diabodies targeting epithelial membrane protein 2 reduce tumorigenicity of human endometrial cancer cell lines Clinical cancer research : an official journal of the American Association for Cancer Research, 2008; 14(22): 7367-77.
Ashorn Sara, Raukola Hanna, Välineva Tuuli, Ashorn Merja, Wei Bo, Braun Jonathan, Rantala Immo, Kaukinen Katri, Luukkaala Tiina, Collin Pekka, Mäki Markku, Iltanen Sari   Elevated serum anti-Saccharomyces cerevisiae, anti-I2 and anti-OmpW antibody levels in patients with suspicion of celiac disease Journal of clinical immunology, 2008; 28(5): 486-94.
Nemetz Nicole, Abad Catalina, Lawson Greg, Nobuta Hiroko, Chhith Seririthanar, Duong Lucy, Tse Gary, Braun Jonathan, Waschek James A   Induction of colitis and rapid development of colorectal tumors in mice deficient in the neuropeptide PACAP Int. J. Cancer, 2008; 122(8): 1803-9.
Wei Bo, McPherson Michael, Turovskaya Olga, Velazquez Peter, Fujiwara Daisuke, Brewer Sarah, Braun Jonathan   Integration of B cells and CD8+ T in the protective regulation of systemic epithelial inflammation Clinical immunology (Orlando, Fla.), 2008; 127(3): 303-12.
Brewer S, McPherson M, Fujiwara D, Turovskaya O, Ziring D, Chen L, Takedatsu H, Targan SR, Wei B, Braun J   Molecular Imaging of Murine Intestinal Inflammation with 2-Deoxy-2-[(18)F]Fluoro-d-Glucose and Positron Emission Tomography Gastroenterology, 2008; 135: 744-755.
Ziring David A, Braun Jonathan   Pediatric inflammatory bowel disease research: on the cutting-edge Pediatric research, 2008; 64(2): 119-20.
Wei Bo, Su Thomas T, Dalwadi Harnisha, Stephan Robert P, Fujiwara Daisuke, Huang Tiffany T, Brewer Sarah, Chen Lindy, Arditi Moshe, Borneman James, Rawlings David J, Braun Jonathan   Resident enteric microbiota and CD8+ T cells shape the abundance of marginal zone B cells European journal of immunology, 2008; 38(12): 3411-25.
Wadehra Madhuri, Mainigi Monica, Morales Shawn A, Rao Rajiv G, Gordon Lynn K, Williams Carmen J, Braun Jonathan   Steroid hormone regulation of EMP2 expression and localization in the endometrium Reprod. Biol. Endocrinol, 2008; 6(8): 15.
Fujiwara Daisuke, Wei Bo, Presley Laura L, Brewer Sarah, McPherson Michael, Lewinski Michael A, Borneman James, Braun Jonathan   Systemic control of plasmacytoid dendritic cells by CD8+ T cells and commensal microbiota J. Immunol, 2008; 180(9): 5843-52.
Takedatsu H, Michelsen KS, Wei B, Landers CJ, Thomas LS, Dhall D, Braun J, Targan SR   TL1A (TNFSF15) Regulates the Development of Chronic Colitis by Modulating Both T-Helper 1 and T-Helper 17 Activation Gastroenterology, 2008; 135: 552-567.
Lin Jan, Ziring David, Desai Sheetal, Kim Sungjin, Wong Maida, Korin Yael, Braun Jonathan, Reed Elaine, Gjertson David, Singh Ram Raj   TNFalpha blockade in human diseases: an overview of efficacy and safety Clinical immunology (Orlando, Fla.), 2008; 126(1): 13-30.
Wong Maida, Ziring David, Korin Yael, Desai Sheetal, Kim Sungjin, Lin Jan, Gjertson David, Braun Jonathan, Reed Elaine, Singh Ram Raj   TNFalpha blockade in human diseases: mechanisms and future directions Clinical immunology (Orlando, Fla.), 2008; 126(2): 121-36.
Velázquez Peter, Wei Bo, McPherson Michael, Mendoza Lesley Marie A, Nguyen Sandra L, Turovskaya Olga, Kronenberg Mitchell, Huang Tiffany T, Schrage Matthew, Lobato Lynn N, Fujiwara Daisuke, Brewer Sarah, Arditi Moshe, Cheng Genhong, Sartor R Balfour, Newberry Rodney D, Braun Jonathan   Villous B cells of the small intestine are specialized for invariant NK T cell dependence Journal of immunology (Baltimore, Md. : 1950), 2008; 180(7): 4629-38.
Shimazaki K, Lepin EJ, Wei B, Nagy AK, Coulam CP, Mareninov S, Fu M, Wu AM, Marks JD, Braun J, Gordon LK, Wadehra M.   bodies targeting epithelial membrane protein 2 reduce tumorigenicity of human endometrial cancer cell lines Clin Cancer Res. , 2008; 14(22): 7367-77.
Braun Jonathan   A NOD to the Dodgers Gastroenterology, 2007; 133(5): 1721-3.
Drake Thomas A, Braun Jonathan, Marchevsky Alberto, Kohane Isaac S, Fletcher Christopher, Chueh Henry, Beckwith Bruce, Berkowicz David, Kuo Frank, Zeng Qing T, Balis Ulysses, Holzbach Ana, McMurry Andrew, Gee Connie E, McDonald Clement J, Schadow Gunther, Davis Mary, Hattab Eyas M, Blevins Lonnie, Hook John, Becich Michael, Crowley Rebecca S, Taube Sheila E, Berman Jules, Berman Jules   A system for sharing routine surgical pathology specimens across institutions: the Shared Pathology Informatics Network Human pathology, 2007; 38(8): 1212-25.
Lin James A, Watanabe Junji, Rozengurt Nora, Narasimha Ajay, Martin Martin G, Wang Jenny, Braun Jonathan, Langenbach Robert, Reddy Srinivasa T   Atherogenic diet causes lethal ileo-ceco-colitis in cyclooxygenase-2 deficient mice Prostaglandins & other lipid mediators, 2007; 84(3-4): 98-107.
Braun Jonathan, Wei Bo   Body traffic: ecology, genetics, and immunity in inflammatory bowel disease Annual review of pathology, 2007; 2(5): 401-29.
Sartor R Balfour, Blumberg Richard S, Braun Jonathan, Elson Charles O, Mayer Lloyd F   CCFA microbial-host interactions workshop: highlights and key observations Inflammatory bowel diseases, 2007; 13(5): 600-19.
Morales Shawn A, Mareninov Sergey, Prasad Pradeep, Wadehra Madhuri, Braun Jonathan, Gordon Lynn K   Collagen gel contraction by ARPE-19 cells is mediated by a FAK-Src dependent pathway Experimental eye research, 2007; 85(6): 790-8.
Shimazaki Kaori, Wadehra Madhuri, Forbes Ashley, Chan Ann M, Goodglick Lee, Kelly Kathleen A, Braun Jonathan, Gordon Lynn K   Epithelial membrane protein 2 modulates infectivity of Chlamydia muridarum (MoPn) Microbes and infection / Institut Pasteur, 2007; 9(8): 1003-10.
An Guangyu, Wei Bo, Xia Baoyun, McDaniel J Michael, Ju Tongzhong, Cummings Richard D, Braun Jonathan, Xia Lijun   Increased susceptibility to colitis and colorectal tumors in mice lacking core 3-derived O-glycans The Journal of experimental medicine, 2007; 204(6): 1417-29.
Forbes Ashley, Wadehra Madhuri, Mareninov Sergei, Morales Shawn, Shimazaki Kaori, Gordon Lynn K, Braun Jonathan   The tetraspan protein EMP2 regulates expression of caveolin-1 The Journal of biological chemistry, 2007; 282(36): 26542-51.
Scupham Alexandra J, Presley Laura L, Wei Bo, Bent Elizabeth, Griffith Natasha, McPherson Michael, Zhu Feilin, Oluwadara Oluwadayo, Rao Nagesh, Braun Jonathan, Borneman James   Abundant and diverse fungal microbiota in the murine intestine Applied and environmental microbiology, 2006; 72(1): 793-801.
Iltanen Sari, Tervo Laura, Halttunen Tuula, Wei Bo, Braun Jonathan, Rantala Immo, Honkanen Teemu, Kronenberg Mitchell, Cheroutre Hilde, Turovskaya Olga, Autio Ville, Ashorn Merja   Elevated serum anti-I2 and anti-OmpW antibody levels in children with IBD Inflammatory bowel diseases, 2006; 12(5): 389-94.
Wadehra Madhuri, Natarajan Sathima, Seligson David B, Williams Carmen J, Hummer Amanda J, Hedvat Cyrus, Braun Jonathan, Soslow Robert A   Expression of epithelial membrane protein-2 is associated with endometrial adenocarcinoma of unfavorable outcome Cancer, 2006; 107(1): 90-8.
Sun Li, Peng Yuanzhen, Sharrow Allison C, Iqbal Jameel, Zhang Zhiyuan, Papachristou Dionysios J, Zaidi Samir, Zhu Ling-Ling, Yaroslavskiy Beatrice B, Zhou Hang, Zallone Alberta, Sairam M Ram, Kumar T Rajendra, Bo Wei, Braun Jonathan, Cardoso-Landa Luis, Schaffler Mitchell B, Moonga Baljit S, Blair Harry C, Zaidi Mone   FSH directly regulates bone mass Cell, 2006; 125(2): 247-60.
Ziring David, Wei Bo, Velazquez Peter, Schrage Matthew, Buckley Nancy E, Braun Jonathan   Formation of B and T cell subsets require the cannabinoid receptor CB2 Immunogenetics, 2006; 58(9): 714-25.
Braun Jonathan   In search of desire: mimicry, MAP, and Crohn's disease Gastroenterology, 2006; 131(1): 312-4.
Wadehra Madhuri, Dayal Molina, Mainigi Monica, Ord Teri, Iyer Ramaswamy, Braun Jonathan, Williams Carmen J   Knockdown of the tetraspan protein epithelial membrane protein-2 inhibits implantation in the mouse Developmental biology, 2006; 292(2): 430-41.
Su Helen, Chang Daisy S, Gambhir Sanjiv S, Braun Jonathan   Monitoring the antitumor response of naive and memory CD8 T cells in RAG1-/- mice by positron-emission tomography Journal of immunology (Baltimore, Md. : 1950), 2006; 176(7): 4459-67.
Braun Jonathan, Targan Stephan R   Multiparameter analysis of immunogenetic mechanisms in clinical diagnosis and management of inflammatory bowel disease Advances in experimental medicine and biology, 2006; 579(2): 209-18.
Veale Jeffrey L, Liang Leonard W, Zhang Qiuheng, Gjertson David W, Du Zeying, Bloomquist Erik W, Jia Juan, Qian Lei, Wilkinson Alan H, Danovitch Gabriel M, Pham Phuong-Thu T, Rosenthal J Thomas, Lassman Charles R, Braun Jonathan, Reed Elaine F, Gritsch H Albin   Noninvasive diagnosis of cellular and antibody-mediated rejection by perforin and granzyme B in renal allografts Human immunology, 2006; 67(10): 777-86.
Huang Tiffany, Wei Bo, Velazquez Peter, Borneman James, Braun Jonathan   Commensal microbiota alter the abundance and TCR responsiveness of splenic naïve CD4+ T lymphocytes Clinical immunology (Orlando, Fla.), 2005; 117(3): 221-30.
Wadehra Madhuri, Forbes Ashley, Pushkarna Natasha, Goodglick Lee, Gordon Lynn K, Williams Carmen J, Braun Jonathan   Epithelial membrane protein-2 regulates surface expression of alphavbeta3 integrin in the endometrium Developmental biology, 2005; 287(2): 336-45.
Wei Bo, Velazquez Peter, Turovskaya Olga, Spricher Karsten, Aranda Richard, Kronenberg Mitchell, Birnbaumer Lutz, Braun Jonathan   Mesenteric B cells centrally inhibit CD4+ T cell colitis through interaction with regulatory T cell subsets Proceedings of the National Academy of Sciences of the United States of America, 2005; 102(6): 2010-5.
Velázquez Peter, Wei Bo, Braun Jonathan   Surveillance B lymphocytes and mucosal immunoregulation Springer seminars in immunopathology, 2005; 26(4): 453-62.
Kassan Hallie, Cohavy Offer, Rosenbaum James T, Braun Jonathan, Gordon Lynn K   Uveitis seroreactivity to candidate pANCA antigens: mycobacterial HupB and histone H1(69-171) Ocular immunology and inflammation, 2005; 13(2-3): 191-8.
Kim SC, Tonkonogy SL, Albright CA, Tsang J, Balish EJ, Braun J, Huycke MM, Sartor RB   Variable phenotypes of enterocolitis in interleukin 10-deficient mice monoassociated with two different commensal bacteria Gastroenterology, 2005; 128(4): 891-906.
Braun Jonathan   Primativism, siderophilic bacteria, and Crohn's disease Inflammatory bowel diseases, 2004; 10(6): 884-5.
Su Helen, Forbes Ashley, Gambhir Sanjiv S, Braun Jonathan   Quantitation of cell number by a positron emission tomography reporter gene strategy Molecular imaging and biology : MIB : the official publication of the Academy of Molecular Imaging, 2004; 6(3): 139-48.
Su Thomas T, Guo Beichu, Wei Bo, Braun Jonathan, Rawlings David J   Signaling in transitional type 2 B cells is critical for peripheral B-cell development Immunological reviews, 2004; 197(1): 161-78.
Wadehra Madhuri, Goodglick Lee, Braun Jonathan   The tetraspan protein EMP2 modulates the surface expression of caveolins and glycosylphosphatidyl inositol-linked proteins Molecular biology of the cell, 2004; 15(5): 2073-83.
Dalwadi Harnisha, Wei Bo, Schrage Matthew, Spicher Karsten, Su Tom T, Birnbaumer Lutz, Rawlings David J, Braun Jonathan   B cell developmental requirement for the G alpha i2 gene Journal of immunology (Baltimore, Md. : 1950), 2003; 170(4): 1707-15.
Stempel David, Sandusky Hallie, Lampi Kirsten, Cilluffo Marianne, Horwitz Joe, Braun Jonathan, Goodglick Lee, Gordon Lynn K   BetaB1-crystallin: identification of a candidate ciliary body uveitis antigen Investigative ophthalmology & visual science, 2003; 44(1): 203-9.
Wadehra Madhuri, Sulur Girija G, Braun Jonathan, Gordon Lynn K, Goodglick Lee   Epithelial membrane protein-2 is expressed in discrete anatomical regions of the eye Experimental and molecular pathology, 2003; 74(2): 106-12.
de Vos Sven, Hofmann Wolf-Karsten, Grogan Thomas M, Krug Utz, Schrage Mathew, Miller Thomas P, Braun Jonathan G, Wachsman William, Koeffler H Phillip, Said Jonathan W   Gene expression profile of serial samples of transformed B-cell lymphomas Laboratory investigation; a journal of technical methods and pathology, 2003; 83(2): 271-85.
Dubey Purnima, Su Helen, Adonai Nona, Du Shouying, Rosato Antonio, Braun Jonathan, Gambhir Sanjiv S, Witte Owen N   Quantitative imaging of the T cell antitumor response by positron-emission tomography Proceedings of the National Academy of Sciences of the United States of America, 2003; 100(3): 1232-7.
Huang Tiffany T, Zong Yumei, Dalwadi Harnisha, Chung Chan, Miceli M Carrie, Spicher Karsten, Birnbaumer Lutz, Braun Jonathan, Aranda Richard   TCR-mediated hyper-responsiveness of autoimmune Galphai2(-/-) mice is an intrinsic naïve CD4(+) T cell disorder selective for the Galphai2 subunit International immunology, 2003; 15(11): 1359-67.
Wadehra Madhuri, Su Helen, Gordon Lynn K, Goodglick Lee, Braun Jonathan   The tetraspan protein EMP2 increases surface expression of class I major histocompatibility complex proteins and susceptibility to CTL-mediated cell death Clinical immunology (Orlando, Fla.), 2003; 107(2): 129-36.
Mendoza M, Wang C, Lin M, Braun J, Sakamoto K   Fizzy-related RNA expression patterns in mammalian development and cell lines Mol.Genet.Metab, 2002; 76(4): 363.
Wadehra Madhuri, Braun Jonathan, Goodglick Lee   One-step RT-PCR for screening microdissected tissue samples BioTechniques, 2002; 32(2): 242, 244, 246, 248.
Wei Bo, Huang Tiffany, Dalwadi Harnisha, Sutton Christopher L, Bruckner David, Braun Jonathan   Pseudomonas fluorescens encodes the Crohn's disease-associated I2 sequence and T-cell superantigen Infection and immunity, 2002; 70(12): 6567-75.
Landers Carol J, Cohavy Offer, Misra Rajeev, Yang Huiying, Lin Ying-Chao, Braun Jonathan, Targan Stephan R   Selected loss of tolerance evidenced by Crohn's disease-associated immune responses to auto- and microbial antigens Gastroenterology, 2002; 123(3): 689-99.
Braun, J., Sands, B.E.   Sorcerer's apprentice Inflammatory Bowel Diseases, 2002; 8(4): 310.
Wadehra M, Iyer R, Goodglick L, Braun J   The tetraspan protein EMP2 interacts with alpha 6beta1 integrins and regulates adhesion J Biol.Chem, 2002; 277: 41094-41100.
Wadehra Madhuri, Iyer Ramaswamy, Goodglick Lee, Braun Jonathan   The tetraspan protein epithelial membrane protein-2 interacts with beta1 integrins and regulates adhesion The Journal of biological chemistry, 2002; 277(43): 41094-100.
Braun Jonathan   Unsettling facts of life: bacterial commensalism, epithelial adherence, and inflammatory bowel disease Gastroenterology, 2002; 122(1): 228-30.
Wang CX, Wadehra M, Fisk BC, Goodglick L, Braun J   Epithelial membrane protein 2, a 4-transmembrane protein that suppresses B-cell lymphoma tumorigenicity Blood, 2001; 97: 3890-3895.
Wei B, Dalwadi H, Gordon LK, Landers CJ, Bruckner D, Targan SR, Braun J   Molecular cloning of a Bacteroides caccae TonB-linked outer membrane protein associated with inflammatory bowel disease Infect Immun, 2001; 69(10): 6044-6054.
Sandusky H, Cilluffo M, Braun J, Gordon LK   Ocular pANCA antigens are expressed in nonpigmented ciliary body epithelium and are conserved in multiple mammalian species Ocul.Immunol Inflamm, 2001; 9(1): 25-34.
Braun J, Sutton CL, Kim J, Yamane A, Dalwadi H, Wei B, Landers CJ, Targan SR   Optimal cases and sites to search for primacy microbial agents in Crohn's disease - Reply, Gastroenterology, 2001; 120(4): 1067-1067.
Dalwadi H, Wei B, Kronenberg M, Sutton CL, Braun J   The Crohn's disease-associated bacterial protein I2 is a novel enteric T cell superantigen Immunity, 2001; 15(1): 149-158.
Braun J, Wei B.   The gut microflora: functional identification techniques, In: Hart A et al. Gut Ecology, 2001; 19-24.
Cohavy O, Bruckner D, Eggena ME, Targan SR, Gordon LK, Braun J   Colonic bacteria express an ulcerative colitis pANCA-related protein epitope Infect.Immun, 2000; 68: 1542-1548.
Dalwadi H, Wei B, Braun J   Defining new pathogens and non-culturable infectious agents: the case of inflammatory bowel disease, Curr. Opinion Gastroenterol. , 2000; 16: 56-59.
Sutton C, Yang HY, Rotter JI, Targan SR, Braun J   Familial expression of anti-Saccharomyces cerevisiae mannan antibodies (ASCA) in affected and unaffected relatives of Crohn's disease patients Gut, 2000; 46: 58-63.
Sutton CL, Kim J, Yamane A, Dalwadi H, Wei B, Landers CJ, Targan SR, Braun J   Identification of a novel bacterial sequence associated with Crohn's disease Gastroenterology, 2000; 119: 23-31.
Eggena M, Cohavy O, Parseghian M, Hamkalo BA, Clemens D, Targan SR, Gordon LK, Braun J   Identification of histone H1 as a cognate antigen of the ulcerative colitis-associated marker antibody pANCA J Autoimmunity, 2000; 14(1): 83-97.
Neshat MN, Goodglick LA, Braun J   Mapping the B cell superantigen binding site for HIV-1 gp120 on a VH3 immunoglobulin Int. Immunol, 2000; 12: 305-312.
Gordon LK, Eggena M, Targan SR, Braun J   Mast cell and neuroendocrine cytoplasmic autoantigen(s) detected by monoclonal pANCA antibodies Clin Immunol, 2000; 94(1): 42-50.
Wang CX, Fisk BC, Wadehra M, Su H, Braun J   Overexpression of murine fizzy-related (fzr) increases natural killer cell-mediated cell death and suppresses tumor growth Blood, 2000; 96: 259-263.
Gordon LK, Eggena M, Targan SR, Braun J   Definition of ocular antigens in ciliary body and retinal ganglion cells by the marker antibody pANCA, Invest Ophthalmol Vis Sci, 1999; 40(6): 1250-1255.
Dalwadi H, Sutton C, Wei B, Yamane A, Targan SR, Braun J   Identification of a novel IBD-associated microbial agent by representational difference analysis, Gastroenterology, 1999; 116: A696-A696.
Cohavy O, Harth G, Horwitz MA, Landers CJ, Sutton C, Targan SR, Braun J   Identification of a novel mycobacterial histone H1 homologue (HupB) as an antigenic target of pANCA monoclonal antibody and serum IgA from patients with Crohn's disease, Infect Immun, 1999; 67: 6510-6517.
Fairhurst RM, Wang CX, Sieling PA, Modlin R, Braun J   CD1 presents antigen from a Gram-negative bacterium,Haemophilus influenzae type B, Infect Immun, 1998; 66: 3523-3526.
Ruemmele FM, Targan SR, Levy G, Dubinsky M, Braun J, Seidman EG   Diagnostic accuracy of serological assays in pediatric inflammatory bowel disease, Gastroenterology, 1998; 115: 822-829.
Gordon LK, Eggena M, Holland GN, Weisz JM, Braun J   pANCA antibodies in patients with anterior uveitis: Identification of a marker antibody usually associated with ulcerative colitis, J Clin Immunol, 1998; 18(4): 264-271.
Goodglick L, Aldrovandi G, Zack JA, Braun J   HIV-1 gp120, an immunoglobulin superantigen, Viral Superantigens, 1997; 171-188.
Fairhurst RM, Valles-Ayoub Y, Neshat MN, Braun J   A DNA repair abnormality specific for rearranged immunoglobulin variable genes in germinal center B cells, Molec Immunol, 1996; 33: 231-244.
Eggena M, Iwanczyk L, Vidrich A, Targan SR, Gordon LK, Braun J   Cloning, expression, and chracterization of an immunogenetic marker antibody in ulcerative colitis, pANCA, J Immunol, 1996; 156: 4005-4011.
Townsley-Fuchs J, Kam L, Fairhurst RM, Gange SJ, Goodglick L, Giorgi JV, Sidell N, Detels R, Braun J   HIV-1 gp120 superantigen-binding serum antibodies. A host susceptibility factor in homosexual HIV-1 transmission, J Clin Invest, 1996; 98: 1794-1801.
Braun J, Valles-Ayoub Y, Berberian L, Eggena M, Gordon LK, Targan SR   On the pathogenesis trail: What marker B cell clones tell us about inflammatory bowel disease, Can J Gastroenterol, 1996; 10: 115-119.
Eggena M, Targan SR, Iwanczyk L, Vidrich A, Gordon LK, Braun J   Phage display cloning and characterization of an immunogenetic marker (perinuclear anti-neutrophil cytoplasmic antibody) in ulcerative colitis, J Immunol, 1996; 156(10): 4005-4011.
Goodglick L, Townsley-Fuchs J, Fairhurst RM, Neshat MN, Marcelo D, Mosier DE, Braun J, Zouali M   The HIV-1 gp120 superantigen: Structural features and its role in viral host-pathogen interaction, B Cell Superantigens, 1996; 145-160.
Goodglick L, Felsher DW, Neshat MS, Braun J   A novel octamer regulatory element in the VH11 leader exon of B-1 cells, J Immunol, 1995; 154(9): 4546-4556.
Goodglick L, Zevit N, Neshat MS, Braun J   Mapping the Ig superantigen-binding site of HIV-1 gp120, J Immunol, 1995; 155(11): 5151-5159.
Storek J, King L, Ferrara S, Marcelo D, Saxon A, Braun J   Abundance of a restricted fetal B cell repertoire in marrow transplant recipients, Bone Marrow Transpl, 1994; 14: 783-790.
Berberian L, Shukla J, Jefferis R, Braun J   Effects of HIV infection on VH3 (D12 idiotope) B cells in vivo, J AIDS, 1994; 7: 641-646.
Berberian LS, Valles-Ayoub Y, King L, Gordon LK, Targan SR, Braun J   Expression of a novel autoantibody defined by the VH3-15 gene in inflammatory bowel disease and Campylobacter jejuni enterocolitis, J Immunol, 1994; 153: 3756-3763.
Braun J, Valles-Ayoub Y, Berberian L, Eggena M, Gordon LK, Targan SR, Sutherland LR, Collins SM, Martin F, McLeod R, Targan SR   On the pathogenesis trail: What marker B cell clones tell us about IBD, Inflammatory Bowel Disease: Basic Research, Cllinical Implications, and Trends in Therapy, 1994; 96-103.
Goodglick L, Braun J   Revenge of the microbes: Superantigens of the T and B cell lineage, Am J Pathol, 1994; 144(4): 623-636.
Berberian L, Goodglick L, Kipps TJ, Braun J   Immunoglobulin VH3 gene products: Natural ligands for HIV gp120, Science, 1993; 261(5128): 1588-1591.
Saxon A, Keld B, Braun J, Dotson A, Sidell N   Longterm administration of 13-cis retinoic acid in common variable immunodeficiency. Circulating IL-6 levels, B cell surface molecule display, and in vitro and in vivo B cell antibody production, Immunology, 1993; 80: 477-487.
Braun J, Felsher DW, Goodglick L   C-myc, MHCI, and NK resistance in immunodeficiency lymphomas, Ann NY Acad Sci, 1992; 651: 467-469.
Schmid I, Krall WJ, Uittenbogaart CH, Braun J, Giorgi JV   Dead cell discrimination with 7-amino-actinomycin D in combination with dual color immunofluorescence in single laser flow cytometry, Cytometry, 1992; 13(2): 204-208.
Krall WJ, Braun J   In situ lacZ retrovirus-marked lymphocytes define a B cell microenvironment in the lymph node medulla, New Biol, 1992; 4(5): 581-590.
Braun J, Berberian L, King L, Sanz I, Govan III HL   Restricted use of fetal VH3 immunoglobulin genes by unselected B cells in the adult. Predominance of 56p1-like VH genes in common variable immunodeficiency, J Clin Invest, 1992; 89(5): 1395-1402.
Berberian L, Valles-Ayoub Y, Sun N, Martinez-Maza O, Braun J   A VH clonal deficit in human immunodeficiency virus-positive individuals reflects a B-cell maturational arrest, Blood, 1991; 78(1): 175-179.
Braun J, Galbraith L, Valles-Ayoub Y, Saxon A   Human immunodeficiency resulting from a maturational arrest of germinal center B cells, Immunol Lett, 1991; 27(3): 205-208.
Felsher DW, Ando D, Braun J   Independent lambda light chain rearrangement in tissue culture-derived murine B cell lines, Int Immunol, 1991; 3: 171-178.
Saxon A, Macy E, Denis K, Tary-Lehmann M, Witte O, Braun J   Limited B cell repertoire in severe combined immunodeficient mice engrafted with peripheral blood mononuclear cells derived from immunodeficient or normal humans, J Clin Invest, 1991; 87(2): 658-665.
Felsher DW, Rhim SH, Braun J   A murine model for B-cell lymphomagenesis in immunocompromised hosts: Natural killer cells are an important component of host resistance to premalignant B-cell lines, Cancer Res, 1990; 50(21): 7050-7056.
Felsher DW, Denis KA, Weiss D, Ando DT, Braun J   A murine model for B-cell lymphomagenesis in immunocompromised hosts: c-myc-rearranged B-cell lines with a premalignant phenotype, Cancer Res, 1990; 50(21): 7042-7049.
Valles-Ayoub Y, Govan Iii HL, Braun J   Evolving abundance and clonal pattern of human germinal center B cells during childhood, Blood, 1990; 76(1): 17-23.
Govan Iii HL, Valles-Ayoub Y, Braun J   Gene-specific DNA repair in human B lymphocytes, Nucleic Acids Res, 1990; 18: 3823-3830.
Braun J, King L   Unique V gene usage by B-Ly1 cell lines, and a discordance between isotype switch commitment and variable region hypermutation, J.Mol.Cell.Immunol, 1989; 4: 121-128.
Braun J, Krall WJ, Clark ME, Govan III HL, Chen U   Inducible Ig heavy chain switching in an IgM+ Ly-1 B cell line. Evidence for a state of switch commitment, J.Mol.Cell.Immunol, 1988; 4: 105-119.
Greenberger JS, Daugherty C, Sakakeeny MA, Braun J, Pierce JH, Eckner RJ, Fitzgerald TJ   Friend virus-infected long-term bone marrow cultures producing colony stimulating factor dependent and independent granulocyte macrophage progenitor cells for over four years in vitro, Leukemia Res, 1987; 11: 51-61.
Braun J, Citri Y, Baltimore D, Forouzanpour F, King L, Teheranizadeh K, Bray M, Kliewer S   B-Ly1 cells: Immortal Ly-1+ B lymphocyte cell lines spontaneously arising in murine splenic cultures, Immunol Rev, 1986; 93: 5-22.
Kiely JM, Braun J, Unanue ER   Autoregulation of B cell growth by an immunoglobulin M antibody, J.Immunol, 1985; 135: 1040-1045.
Unanue ER, Braun J   Immunofluorescence methods to study cell surface and cytoplasmic proteins and their dynamics, Handbook of Experimental Immunology, D.M.Weir and L.A.Herzenberg, eds, 1984; Fourth edition: .
Braun J, Kiely JM, Unanue ER   Propagation of B lymphocytes in vitro, Curr.Topics.Micro.Immunol, 1984; 113: 237-240.
Allen PM, Beller DI, Braun J, Unanue ER   The handling of LIsteria monocytogenes by macrophages: the search for an immunogenic molecules in antigen presentation, J Immunol, 1984; 132: 323-331.
Braun J   Spontaneous in vitro occurrence and long-term culture of murine B lymphoblast cell lines, J.Immunol, 1983; 130: 2113-2116.
Braun J, Unanue ER   Surface immunoglobulin and the lymphocyte cytoskeleton, Fed.Proc, 1983; 42: 2446-2451.
Braun J, Unanue ER   The lymphocyte cytoskeleton and its control of surface receptor functions, Semin.Hematol, 1983; 20: 322-326.
Braun J, Unanue ER   Calcium and lymphocyte surface macromolecules, Calcium in Normal and Pathological Biological Systems, 1982; 1: 175-182.
Braun J, Hochman PS, Unanue ER   Ligand-induced association of surface immunoglobulin with the detergent-insoluble cytoskeletal matrix is the B lymphocyte, J.Immunol, 1982; 128: 1198-1204.
Braun J   Receptor-cytoskeleton interactions in the lymphocyte, Immunol.Today, 1982; 4: 21-25.
Braun J, Unanue ER   Biological basis for the function of surface immunoglobulin, B Lymphocytes in the Immune Response, 1981; 169-175: .
Braun J, Unanue ER   B lymphocyte biology studied with antigen-Ig antibodies, Immunol.Rev, 1980; 52: 3-25.
Braun J, Rosen FS, Unanue ER   Capping and adenosine metabolism: genetic and pharmacologic studies, J Exp Med, 1980; 151: 174-183.
Ault KA, Braun J   Cell surface recognition and transmembrane control, Biological Basis of Immunodeficiency, E.W.Gelfand, and H.-M.Dosch, eds.Raven Press, New York, 1980; 155-168: .

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