Peipei Ping, Ph.D.


Work Titles
UCLA Professor, Medicine Professor, Physiology Member, Bioinformatics GPB Home Area Member, Molecular, Cellular & Integrative Physiology GPB Home Area Faculty, Cardiovascular Research Laboratory Faculty, Cardiology
Education:
Degrees:
Ph.D., University of Arizona, 1985 - 1990

Contact Information:

Email Address:

pping@mednet.ucla.edu


Website:

Laboratory Website

Fax Number:

310-267-5623

Lab Number:

310-267-5624

Office Phone Number:

310-206-0058

Work Address:

Office
Rm 1619 MRL
Los Angeles, CA 90095


Publications:

A selected list of publications:

Li Haomin, Zong Nobel C, Liang Xiangbo, Kim Allen K, Choi Jeong Ho, Deng Ning, Zelaya Ivette, Lam Maggie, Duan Huilong, Ping Peipei   A novel spectral library workflow to enhance protein identifications Journal of proteomics, 2013; 81(8): 173-84.
Gómez John, García Leyla J, Salazar Gustavo A, Villaveces Jose, Gore Swanand, García Alexander, Martín Maria J, Launay Guillaume, Alcántara Rafael, Del-Toro Noemi, Dumousseau Marine, Orchard Sandra, Velankar Sameer, Hermjakob Henning, Zong Chenggong, Ping Peipei, Corpas Manuel, Jiménez Rafael C   BioJS: an open source JavaScript framework for biological data visualization Bioinformatics (Oxford, England), 2013; 29(8): 1103-4.
Ahuja Preeti, Wanagat Jonathan, Wang Zhihua, Wang Yibin, Liem David A, Ping Peipei, Antoshechkin Igor A, Margulies Kenneth B, Maclellan W Robb   Divergent mitochondrial biogenesis responses in human cardiomyopathy Circulation, 2013; 127(19): 1957-67.
Zong Nobel, Li Haomin, Li Hua, Lam Maggie P, Jimenez Rafael C, Kim Christina S, Deng Ning, Kim Allen K, Choi Jeong H, Zelaya Ivette, Liem David A A, Meyer David, Odeberg Jacob, Fang Caiyun, Lu Hao-Jie, Xu Tao, Weiss James N, Duan Huilong, Uhlen Mathias, Yates John, Apweiler Rolf, Ge Junbo, Hermjakob Henning, Ping Peipei   Integration of Cardiac Proteome Biology and Medicine by a Specialized Knowledgebase Circulation research, 2013; 62: .
Henze Marcus, Patrick Stacey E, Hinken Aaron, Scruggs Sarah B, Goldspink Paul, de Tombe Pieter P, Kobayashi Minae, Ping Peipei, Kobayashi Tomoyoshi, Solaro R John   New insights into the functional significance of the acidic region of the unique N-terminal extension of cardiac troponin I Biochimica et biophysica acta, 2013; 1833(4): 823-32.
Youn Ji-Youn, Zhang Jun, Zhang Yixuan, Chen Houzao, Liu Depei, Ping Peipei, Weiss James N, Cai Hua   Oxidative stress in atrial fibrillation: An emerging role of NADPH oxidase Journal of molecular and cellular cardiology, 2013; 62: 72-9.
Wang Ding, Fang Caiyun, Zong Nobel C, Liem David A, Cadeiras Martin, Scruggs Sarah B, Yu Hongxiu, Kim Allen K, Yang Pengyuan, Deng Mario, Lu Haojie, Ping Peipei   Regulation of Acetylation Restores Proteolytic Function of Diseased Myocardium in Mouse and Human Molecular & cellular proteomics : MCP, 2013; .
Martin Lisa J, Lau Edward, Singh Harpreet, Vergnes Laurent, Tarling Elizabeth J, Mehrabian Margarete, Mungrue Imran, Xiao Sheila, Shih Diana, Castellani Lawrence, Ping Peipei, Reue Karen, Stefani Enrico, Drake Thomas A, Bostrom Kristina, Lusis Aldons J   Response to Pomozi et al's research commentary Circulation research, 2013; 112(11): e152-3.
Lam Maggie P Y, Lau Edward, Scruggs Sarah B, Wang Ding, Kim Tae-Young, Liem David A, Zhang Jun, Ryan Christopher M, Faull Kym F, Ping Peipei   Site-specific quantitative analysis of cardiac mitochondrial protein phosphorylation Journal of proteomics, 2013; 81(8): 15-23.
Chan Cy X Avia, Khan Anjum A, Choi Jh Howard, Ng Cm Dominic, Cadeiras Martin, Deng Mario, Ping Peipei   Technology platform development for targeted plasma metabolites in human heart failure Clinical proteomics, 2013; 10(1): 7.
Martin Lisa J, Lau Edward, Singh Harpreet, Vergnes Laurent, Tarling Elizabeth J, Mehrabian Margarete, Mungrue Imran, Xiao Sheila, Shih Diana, Castellani Lawrence, Ping Peipei, Reue Karen, Stefani Enrico, Drake Thomas A, Bostrom Kristina, Lusis Aldons J   ABCC6 localizes to the mitochondria-associated membrane Circulation research, 2012; 111(5): 516-20.
Lam Maggie P Y, Scruggs Sarah B, Kim Tae-Young, Zong Chenggong, Lau Edward, Wang Ding, Ryan Christopher M, Faull Kym F, Ping Peipei   An MRM-based workflow for quantifying cardiac mitochondrial protein phosphorylation in murine and human tissue Journal of proteomics, 2012; 75(15): 4602-9.
Lam Maggie P Y, Vivanco Fernando, Scholten Arjen, Hermjakob Henning, Van Eyk Jennifer, Ping Peipei   HUPO 2011: The new Cardiovascular Initiative - integrating proteomics and cardiovascular biology in health and disease Proteomics, 2012; 12(6): 749-51.
Kim Tae-Young, Wang Ding, Kim Allen K, Lau Edward, Lin Amanda J, Liem David A, Zhang Jun, Zong Nobel C, Lam Maggie P Y, Ping Peipei   Metabolic labeling reveals proteome dynamics of mouse mitochondria Molecular & cellular proteomics : MCP, 2012; 11(12): 1586-94.
Zhang Jun, Lin Amanda, Powers Jared, Lam Maggie P, Lotz Christopher, Liem David, Lau Edward, Wang Ding, Deng Ning, Korge Paavo, Zong Nobel C, Cai Hua, Weiss James, Ping Peipei   Perspectives on: SGP symposium on mitochondrial physiology and medicine: mitochondrial proteome design: from molecular identity to pathophysiological regulation The Journal of general physiology, 2012; 139(6): 395-406.
Scruggs Sarah B, Zong Nobel C, Wang Ding, Stefani Enrico, Ping Peipei   Post-translational modification of cardiac proteasomes: functional delineation enabled by proteomics American journal of physiology. Heart and circulatory physiology, 2012; 303(1): H9-18.
Kinsinger Christopher R, Apffel James, Baker Mark, Bian Xiaopeng, Borchers Christoph H, Bradshaw Ralph, Brusniak Mi-Youn, Chan Daniel W, Deutsch Eric W, Domon Bruno, Gorman Jeff, Grimm Rudolf, Hancock William, Hermjakob Henning, Horn David, Hunter Christie, Kolar Patrik, Kraus Hans-Joachim, Langen Hanno, Linding Rune, Moritz Robert L, Omenn Gilbert S, Orlando Ron, Pandey Akhilesh, Ping Peipei, Rahbar Amir, Rivers Robert, Seymour Sean L, Simpson Richard J, Slotta Douglas, Smith Richard D, Stein Stephen E, Tabb David L, Tagle Danilo, Yates John R, Rodriguez Henry   Recommendations for mass spectrometry data quality metrics for open access data (corollary to the Amsterdam Principles) Journal of proteome research, 2012; 11(2): 1412-9.
Kinsinger Christopher R, Apffel James, Baker Mark, Bian Xiaopeng, Borchers Christoph H, Bradshaw Ralph, Brusniak Mi-Youn, Chan Daniel W, Deutsch Eric W, Domon Bruno, Gorman Jeff, Grimm Rudolf, Hancock William, Hermjakob Henning, Horn David, Hunter Christie, Kolar Patrik, Kraus Hans-Joachim, Langen Hanno, Linding Rune, Moritz Robert L, Omenn Gilbert S, Orlando Ron, Pandey Akhilesh, Ping Peipei, Rahbar Amir, Rivers Robert, Seymour Sean L, Simpson Richard J, Slotta Douglas, Smith Richard D, Stein Stephen E, Tabb David L, Tagle Danilo, Yates John R, Rodriguez Henry   Recommendations for mass spectrometry data quality metrics for open access data (corollary to the Amsterdam principles) Proteomics, 2012; 12(1): 11-20.
Lau Edward, Wang Ding, Zhang Jun, Yu Hongxiu, Lam Maggie P Y, Liang Xiangbo, Zong Nobel, Kim Tae-Young, Ping Peipei   Substrate- and isoform-specific proteome stability in normal and stressed cardiac mitochondria Circulation research, 2012; 110(9): 1174-8.
Scruggs Sarah B, Ping Peipei, Zong Chenggong   Heterogeneous cardiac proteasomes: mandated by diverse substrates? Physiology (Bethesda, Md.), 2011; 26(2): 106-14.
Ping Peipei, Mayor Thibault, Huang Lan   Managing the quality of life for proteins: focusing on the exit path. Introduction Molecular & cellular proteomics : MCP, 2011; 10(5): O111.009969.
Lotz Christopher, Liem David, Ping Peipei   New frontiers in myocardial protection: a systems biology approach Journal of cardiovascular pharmacology and therapeutics, 2011; 16(3-4): 285-9.
Schwartz Longacre Lisa, Kloner Robert A, Arai Andrew E, Baines Christopher P, Bolli Roberto, Braunwald Eugene, Downey James, Gibbons Raymond J, Gottlieb Roberta A, Heusch Gerd, Jennings Robert B, Lefer David J, Mentzer Robert M, Murphy Elizabeth, Ovize Michel, Ping Peipei, Przyklenk Karin, Sack Michael N, Vander Heide Richard S, Vinten-Johansen Jakob, Yellon Derek M, Yellon Derek M   New horizons in cardioprotection: recommendations from the 2010 National Heart, Lung, and Blood Institute Workshop Circulation, 2011; 124(10): 1172-9.
Deng N, Zhang J, Zong C, Wang Y, Lu H, Yang P, Wang W, Young GW, Wang Y, Korge P, Lotz C, Doran P, Liem DA, Apweiler R, Weiss JN, Duan H, Ping P   Phosphoproteome Analysis Reveals Regulatory Sites in Major pathways of Cardiac Mitochondria, Mol Cell Proteomics, 2010; .
Deng Ning, Zhang Jun, Zong Chenggong, Wang Yueju, Lu Haojie, Yang Pengyuan, Wang Wenhai, Young Glen W, Wang Yibin, Korge Paavo, Lotz Christopher, Doran Philip, Liem David A, Apweiler Rolf, Weiss James N, Duan Huilong, Ping Peipei   Phosphoproteome analysis reveals regulatory sites in major pathways of cardiac mitochondria Molecular & cellular proteomics : MCP, 2011; 10(2): M110.000117.
Wang Ding, Zong Chenggong, Koag Myong-chul, Wang Yueju, Drews Oliver, Fang Caiyun, Scruggs Sarah B, Ping Peipei   Proteome dynamics and proteome function of cardiac 19S proteasomes Molecular & cellular proteomics : MCP, 2011; 10(5): M110.006122.
Kinsinger Christopher R, Apffel James, Baker Mark, Bian Xiaopeng, Borchers Christoph H, Bradshaw Ralph, Brusniak Mi-Youn, Chan Daniel W, Deutsch Eric W, Domon Bruno, Gorman Jeff, Grimm Rudolf, Hancock William, Hermjakob Henning, Horn David, Hunter Christie, Kolar Patrik, Kraus Hans-Joachim, Langen Hanno, Linding Rune, Moritz Robert L, Omenn Gilbert S, Orlando Ron, Pandey Akhilesh, Ping Peipei, Rahbar Amir, Rivers Robert, Seymour Sean L, Simpson Richard J, Slotta Douglas, Smith Richard D, Stein Stephen E, Tabb David L, Tagle Danilo, Yates John R, Rodriguez Henry   Recommendations for mass spectrometry data quality metrics for open access data (corollary to the Amsterdam Principles) Molecular & cellular proteomics : MCP, 2011; 10(12): O111.015446.
Kinsinger Christopher R, Apffel James, Baker Mark, Bian Xiaopeng, Borchers Christoph H, Bradshaw Ralph, Brusniak Mi-Youn, Chan Daniel W, Deutsch Eric W, Domon Bruno, Gorman Jeff, Grimm Rudolf, Hancock William, Hermjakob Henning, Horn David, Hunter Christie, Kolar Patrik, Kraus Hans-Joachim, Langen Hanno, Linding Rune, Moritz Robert L, Omenn Gilbert S, Orlando Ron, Pandey Akhilesh, Ping Peipei, Rahbar Amir, Rivers Robert, Seymour Sean L, Simpson Richard J, Slotta Douglas, Smith Richard D, Stein Stephen E, Tabb David L, Tagle Danilo, Yates John R, Rodriguez Henry   Recommendations for mass spectrometry data quality metrics for open access data (corollary to the Amsterdam principles) Proteomics. Clinical applications, 2011; 5(11-12): 580-9.
Franklin Sarah, Zhang Michael J, Chen Haodong, Paulsson Anna K, Mitchell-Jordan Scherise A, Li Yifeng, Ping Peipei, Vondriska Thomas M   Specialized compartments of cardiac nuclei exhibit distinct proteomic anatomy Molecular & cellular proteomics : MCP, 2011; 10(1): M110.000703.
Ping Peipei, Chan Daniel W, Srinivas Pothur   Advancing cardiovascular biology and medicine via proteomics: Opportunities and present challenges of cardiovascular proteomics Circulation, 2010; 121(21): 2326-8.
Drews Oliver, Tsukamoto Osamu, Liem David, Streicher John, Wang Yibin, Ping Peipei   Differential regulation of proteasome function in isoproterenol-induced cardiac hypertrophy Circulation research, 2010; 107(9): 1094-101.
Lotz Christopher, Ping Peipei, Kehl Franz   Letter by Lotz et al regarding article, "Reactive oxygen species-induced stimulation of 5' AMP-activated protein kinase mediates sevoflurane-induced cardioprotection" Circulation, 2010; 121(18): e399; author reply e400.
Ryan Christopher M, Souda Puneet, Bassilian Sara, Ujwal Rachna, Zhang Jun, Abramson Jeff, Ping Peipei, Durazo Armando, Bowie James U, Hasan S Saif, Baniulis Danas, Cramer William A, Faull Kym F, Whitelegge Julian P   Post-translational modifications of integral membrane proteins resolved by top-down Fourier transform mass spectrometry with collisionally activated dissociation Molecular & cellular proteomics : MCP, 2010; 9(5): 791-803.
Ota Asuka, Zhang Jun, Ping Peipei, Han Jiahuai, Wang Yibin   Specific regulation of noncanonical p38alpha activation by Hsp90-Cdc37 chaperone complex in cardiomyocyte Circulation research, 2010; 106(8): 1404-12.
Zhang Michael J, Franklin Sarah, Li Yifeng, Wang Sujing, Ru Xiaochen, Mitchell-Jordan Scherise A, Mano Hiroyuki, Stefani Enrico, Ping Peipei, Vondriska Thomas M   Stress signaling by Tec tyrosine kinase in the ischemic myocardium American journal of physiology. Heart and circulatory physiology, 2010; 299(3): H713-22.
Wu Hsin-Yi, Tseng Vincent Shin-Mu, Chen Lien-Chin, Chang Yu-Chen, Ping Peipei, Liao Chen-Chung, Tsay Yeou-Guang, Yu Jau-Song, Liao Pao-Chi   Combining alkaline phosphatase treatment and hybrid linear ion trap/Orbitrap high mass accuracy liquid chromatography-mass spectrometry data for the efficient and confident identification of protein phosphorylation Analytical chemistry, 2009; 81(18): 7778-87.
Gomes Aldrin V, Young Glen W, Wang Yueju, Zong Chenggong, Eghbali Mansoureh, Drews Oliver, Lu Haojie, Stefani Enrico, Ping Peipei   Contrasting proteome biology and functional heterogeneity of the 20 S proteasome complexes in mammalian tissues Molecular & cellular proteomics : MCP, 2009; 8(2): 302-15.
Ujwal Rachna, Cascio Duilio, Chaptal Vincent, Ping Peipei, Abramson Jeff   Crystal packing analysis of murine VDAC1 crystals in a lipidic environment reveals novel insights on oligomerization and orientation Channels (Austin, Tex.), 2009; 3(3): 167-70.
Ping P   Getting to the Heart of Proteomics, New Eng J Med, 2009; 5(360): 532-534.
Ping Peipei   Getting to the heart of proteomics The New England journal of medicine, 2009; 360(5): 532-4.
Orchard Sandra, Ping Peipei   HUPO World Congress Publication Committee meeting. August 2008, Amsterdam, The Netherlands Proteomics, 2009; 9(3): 502-3.
Lu Gang, Sun Haipeng, She Pengxiang, Youn Ji-Youn, Warburton Sarah, Ping Peipei, Vondriska Thomas M, Cai Hua, Lynch Christopher J, Wang Yibin   Protein phosphatase 2Cm is a critical regulator of branched-chain amino acid catabolism in mice and cultured cells The Journal of clinical investigation, 2009; 119(6): 1678-87.
Mayr Manuel, Liem David, Zhang Jun, Li Xiaohai, Avliyakulov Nuraly K, Yang Jeong In, Young Glen, Vondriska Tom M, Ladroue Christophe, Madhu Basetti, Griffiths John R, Gomes Aldrin, Xu Qingbo, Ping Peipei   Proteomic and metabolomic analysis of cardioprotection: Interplay between protein kinase C epsilon and delta in regulating glucose metabolism of murine hearts Journal of molecular and cellular cardiology, 2009; 46(2): 268-77.
Rodriguez Henry, Snyder Mike, Uhlén Mathias, Andrews Phil, Beavis Ronald, Borchers Christoph, Chalkley Robert J, Cho Sang Yun, Cottingham Katie, Dunn Michael, Dylag Tomasz, Edgar Ron, Hare Peter, Heck Albert J R, Hirsch Roland F, Kennedy Karen, Kolar Patrik, Kraus Hans-Joachim, Mallick Parag, Nesvizhskii Alexey, Ping Peipei, Pontén Fredrik, Yang Liming, Yates John R, Stein Stephen E, Hermjakob Henning, Kinsinger Christopher R, Apweiler Rolf   Recommendations from the 2008 International Summit on Proteomics Data Release and Sharing Policy: the Amsterdam principles Journal of proteome research, 2009; 8(7): 3689-92.
Zhang Jun, Liem David A, Mueller Michael, Wang Yueju, Zong Chenggong, Deng Ning, Vondriska Thomas M, Korge Paavo, Drews Oliver, Maclellan W Robb, Honda Henry, Weiss James N, Apweiler Rolf, Ping Peipei   Altered proteome biology of cardiac mitochondria under stress conditions Journal of proteome research, 2008; 7(6): 2204-14.
Warburton Sarah, White Melanie Y, Van Eyk Jennifer E, Cotter Robert J, Ping Peipei, Dunn Michael J, Vondriska Thomas M   Cardiovascular Initiative of the Human Proteome Organisation, 5th Workshop October 2007, Seoul, Korea Proteomics, 2008; 8(5): 924-6.
Liem David A, Zhao Peng, Angelis Ekaterini, Chan Shing S, Zhang Jun, Wang Guangwu, Berthet Cyril, Kaldis Philipp, Ping Peipei, MacLellan W Robb   Cyclin-dependent kinase 2 signaling regulates myocardial ischemia/reperfusion injury Journal of molecular and cellular cardiology, 2008; 45(5): 610-6.
Baldán Angel, Gomes Aldrin V, Ping Peipei, Edwards Peter A   Loss of ABCG1 results in chronic pulmonary inflammation Journal of immunology (Baltimore, Md. : 1950), 2008; 180(5): 3560-8.
Maclellan W Robb, Wang Yibin, Vondriska Thomas M, Weiss James N, Ping Peipei   Proteomic insights into cardiac cell death and survival Proteomics. Clinical applications, 2008; 2(6): 837-44.
Korge Paavo, Ping Peipei, Weiss James N   Reactive oxygen species production in energized cardiac mitochondria during hypoxia/reoxygenation: modulation by nitric oxide Circulation research, 2008; 103(8): 873-80.
Lu Haojie, Zong Chenggong, Wang Yueju, Young Glen W, Deng Ning, Souda Pete, Li Xiaohai, Whitelegge Julian, Drews Oliver, Yang Peng-Yuan, Ping Peipei   Revealing the dynamics of the 20 S proteasome phosphoproteome: a combined CID and electron transfer dissociation approach Molecular & cellular proteomics : MCP, 2008; 7(11): 2073-89.
Zhang Jun, Li Xiaohai, Mueller Michael, Wang Yueju, Zong Chenggong, Deng Ning, Vondriska Thomas M, Liem David A, Yang Jeong-In, Korge Paavo, Honda Henry, Weiss James N, Apweiler Rolf, Ping Peipei   Systematic characterization of the murine mitochondrial proteome using functionally validated cardiac mitochondria Proteomics, 2008; 8(8): 1564-75.
Ujwal Rachna, Cascio Duilio, Colletier Jacques-Philippe, Faham Salem, Zhang Jun, Toro Ligia, Ping Peipei, Abramson Jeff   The crystal structure of mouse VDAC1 at 2.3 A resolution reveals mechanistic insights into metabolite gating Proceedings of the National Academy of Sciences of the United States of America, 2008; 105(46): 17742-7.
Zong Chenggong, Young Glen W, Wang Yueju, Lu Haojie, Deng Ning, Drews Oliver, Ping Peipei   Two-dimensional electrophoresis-based characterization of post-translational modifications of mammalian 20S proteasome complexes Proteomics, 2008; 8(23-24): 5025-37.
Young Glen W, Wang Yueju, Ping Peipei   Understanding proteasome assembly and regulation: importance to cardiovascular medicine Trends in cardiovascular medicine, 2008; 18(3): 93-8.
Ping Peipei, Bergeron John, Apweiler Rolf   Wiley-VCH and HUPO: A Global Effort to Advance Proteomic Science Proteomics. Clinical applications, 2008; 2(1): 4-6.
Ping Peipei, Bergeron John, Apweiler Rolf   Wiley-VCH and HUPO: a global effort to advance proteomic science Proteomics, 2008; 8(1): 4-6.
Kawaguchi Riki, Yu Jiamei, Honda Jane, Hu Jane, Whitelegge Julian, Ping Peipei, Wiita Patrick, Bok Dean, Sun Hui   A membrane receptor for retinol binding protein mediates cellular uptake of vitamin A Science (New York, N.Y.), 2007; 315(5813): 820-5.
Drews Oliver, Zong Chenggong, Ping Peipei   Exploring proteasome complexes by proteomic approaches Proteomics, 2007; 7(7): 1047-58.
Drews Oliver, Wildgruber Robert, Zong Chenggong, Sukop Ute, Nissum Mikkel, Weber Gerhard, Gomes Aldrin V, Ping Peipei   Mammalian proteasome subpopulations with distinct molecular compositions and proteolytic activities Molecular & cellular proteomics : MCP, 2007; 6(11): 2021-31.
Liem David A, Honda Henry M, Zhang Jun, Woo David, Ping Peipei   Past and present course of cardioprotection against ischemia-reperfusion injury Journal of applied physiology (Bethesda, Md. : 1985), 2007; 103(6): 2129-36.
Orchard Sandra, Heck Albert, Uhlen Mathias, Ping Peipei   Publication Committee meeting. HUPO 5th annual World Congress. Long Beach, CA, USA 30 October 2006 Proteomics, 2007; 7(7): 1009-11.
Taylor Chris F, Paton Norman W, Lilley Kathryn S, Binz Pierre-Alain, Julian Randall K, Jones Andrew R, Zhu Weimin, Apweiler Rolf, Aebersold Ruedi, Deutsch Eric W, Dunn Michael J, Heck Albert J R, Leitner Alexander, Macht Marcus, Mann Matthias, Martens Lennart, Neubert Thomas A, Patterson Scott D, Ping Peipei, Seymour Sean L, Souda Puneet, Tsugita Akira, Vandekerckhove Joel, Vondriska Thomas M, Whitelegge Julian P, Wilkins Marc R, Xenarios Ioannnis, Yates John R, Hermjakob Henning   The minimum information about a proteomics experiment (MIAPE) Nature biotechnology, 2007; 25(8): 887-93.
Drake Thomas A, Ping Peipei   Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Proteomics approaches to the systems biology of cardiovascular diseases Journal of lipid research, 2007; 48(1): 1-8.
Arab Sara, Gramolini Anthony O, Ping Peipei, Kislinger Thomas, Stanley Brian, van Eyk Jennifer, Ouzounian Maral, MacLennan David H, Emili Andrew, Liu Peter P   Cardiovascular proteomics: tools to develop novel biomarkers and potential applications Journal of the American College of Cardiology, 2006; 48(9): 1733-41.
Abdellatif Ahmed A, Pelt Jennifer L, Benton Richard L, Howard Russell M, Tsoulfas Pantelis, Ping Peipei, Xu Xiao-Ming, Whittemore Scott R   Gene delivery to the spinal cord: comparison between lentiviral, adenoviral, and retroviral vector delivery systems Journal of neuroscience research, 2006; 84(3): 553-67.
Orchard Sandra, Ping Peipei   HUPO Publications Committee Meeting: 21 April 2006, San Francisco, CA, USA Proteomics, 2006; 6(16): 4436-8.
Gomes AV, Zong C, Edmondson RD, Li X, Stefani E, Zhang J, Jones RC, Thyparambil S, Ping P   Mapping the murine cardiac 26S proteasome complexes, Circ Res, 2006; 99(4): 362-371.
Gomes Aldrin V, Zong Chenggong, Edmondson Ricky D, Li Xiaohai, Stefani Enrico, Zhang Jun, Jones Richard C, Thyparambil Sheeno, Wang Guang-Wu, Qiao Xin, Bardag-Gorce Fawzia, Ping Peipei   Mapping the murine cardiac 26S proteasome complexes Circulation research, 2006; 99(4): 362-71.
Honda Henry M, Ping Peipei   Mitochondrial permeability transition in cardiac cell injury and death Cardiovascular drugs and therapy / sponsored by the International Society of Cardiovascular Pharmacotherapy, 2006; 20(6): 425-32.
Gomes Aldrin V, Zong Chenggong, Ping Peipei   Protein degradation by the 26S proteasome system in the normal and stressed myocardium Antioxidants & redox signaling, 2006; 8(9-10): 1677-91.
Mayr Manuel, Zhang Jun, Greene Andrew S, Gutterman David, Perloff Joseph, Ping Peipei   Proteomics-based development of biomarkers in cardiovascular disease: mechanistic, clinical, and therapeutic insights Molecular & cellular proteomics : MCP, 2006; 5(10): 1853-64.
Zong C, Gomes AV, Drews O, Li X, Young GW, Berhane B, Qiao X, French SW, Bardag-Gorce F, Ping P   Regulation of Murine Cardiac 20S Proteasomes: Role of Associating Partners, Circ Res, 2006; 99(4): 372-380.
Zong Chenggong, Gomes Aldrin V, Drews Oliver, Li Xiaohai, Young Glen W, Berhane Beniam, Qiao Xin, French Samuel W, Bardag-Gorce Fawzia, Ping Peipei   Regulation of murine cardiac 20S proteasomes: role of associating partners Circulation research, 2006; 99(4): 372-80.
Ping Peipei, Vondriska Thomas M, Creighton Chad J, Gandhi T K B, Yang Ziping, Menon Rajasree, Kwon Min-Seok, Cho Sang Yun, Drwal Garry, Kellmann Markus, Peri Suraj, Suresh Shubha, Gronborg Mads, Molina Henrik, Chaerkady Raghothama, Rekha B, Shet Arun S, Gerszten Robert E, Wu Haifeng, Raftery Mark, Wasinger Valerie, Schulz-Knappe Peter, Hanash Samir M, Paik Young-Ki, Hancock William S, States David J, Omenn Gilbert S, Pandey Akhilesh   A functional annotation of subproteomes in human plasma Proteomics, 2005; 5(13): 3506-19.
Berhane Beniam T, Zong Chenggong, Liem David A, Huang Aaron, Le Steven, Edmondson Ricky D, Jones Richard C, Qiao Xin, Whitelegge Julian P, Ping Peipei, Vondriska Thomas M   Cardiovascular-related proteins identified in human plasma by the HUPO Plasma Proteome Project pilot phase Proteomics, 2005; 5(13): 3520-30.
Zhang Jun, Baines Christopher P, Zong Chenggong, Cardwell Ernest M, Wang Guangwu, Vondriska Thomas M, Ping Peipei   Functional proteomic analysis of a three-tier PKCepsilon-Akt-eNOS signaling module in cardiac protection American journal of physiology. Heart and circulatory physiology, 2005; 288(2): H954-61.
Cao Qilin, Xu Xiao-Ming, Devries William H, Enzmann Gaby U, Ping Peipei, Tsoulfas Pantelis, Wood Patrick M, Bunge Mary Bartlett, Whittemore Scott R   Functional recovery in traumatic spinal cord injury after transplantation of multineurotrophin-expressing glial-restricted precursor cells The Journal of neuroscience : the official journal of the Society for Neuroscience, 2005; 25(30): 6947-57.
Omenn Gilbert S, Ping Peipei   HUPO 3rd annual World Congress on Proteomics. 25-27th October, 2004, Beijing, China Expert review of proteomics, 2005; 2(1): 9-12.
Wang Guangwu, Liem David A, Vondriska Thomas M, Honda Henry M, Korge Paavo, Pantaleon Dawn M, Qiao Xin, Wang Yibin, Weiss James N, Ping Peipei   Nitric oxide donors protect murine myocardium against infarction via modulation of mitochondrial permeability transition American journal of physiology. Heart and circulatory physiology, 2005; 288(3): H1290-5.
Omenn Gilbert S, States David J, Adamski Marcin, Blackwell Thomas W, Menon Rajasree, Hermjakob Henning, Apweiler Rolf, Haab Brian B, Simpson Richard J, Eddes James S, Kapp Eugene A, Moritz Robert L, Chan Daniel W, Rai Alex J, Admon Arie, Aebersold Ruedi, Eng Jimmy, Hancock William S, Hefta Stanley A, Meyer Helmut, Paik Young-Ki, Yoo Jong-Shin, Ping Peipei, Pounds Joel, Adkins Joshua, Qian Xiaohong, Wang Rong, Wasinger Valerie, Wu Chi Yue, Zhao Xiaohang, Zeng Rong, Archakov Alexander, Tsugita Akira, Beer Ilan, Pandey Akhilesh, Pisano Michael, Andrews Philip, Tammen Harald, Speicher David W, Hanash Samir M   Overview of the HUPO Plasma Proteome Project: results from the pilot phase with 35 collaborating laboratories and multiple analytical groups, generating a core dataset of 3020 proteins and a publicly-available database Proteomics, 2005; 5(13): 3226-45.
McCarthy Joy, McLeod Christopher J, Minners Jan, Essop M Faadiel, Ping Peipei, Sack Michael N   PKCepsilon activation augments cardiac mitochondrial respiratory post-anoxic reserve--a putative mechanism in PKCepsilon cardioprotection Journal of molecular and cellular cardiology, 2005; 38(4): 697-700.
Gomes Aldrin V, Zong Chenggong, Edmondson Ricky D, Berhane Beniam T, Wang Guang-Wu, Le Steven, Young Glen, Zhang Jun, Vondriska Thomas M, Whitelegge Julian P, Jones Richard C, Joshua Irving G, Thyparambil Sheeno, Pantaleon Dawn, Qiao Joe, Loo Joseph, Ping Peipei   The murine cardiac 26S proteasome: an organelle awaiting exploration Annals of the New York Academy of Sciences, 2005; 1047(30): 197-207.
Zhang Jun, Ping Peipei, Wang Guang-Wu, Lu Ming, Pantaleon Dawn, Tang Xian-Liang, Bolli Roberto, Vondriska Thomas M   Bmx, a member of the Tec family of nonreceptor tyrosine kinases, is a novel participant in pharmacological cardioprotection American journal of physiology. Heart and circulatory physiology, 2004; 287(5): H2364-6.
MacLellan W Robb, Ping Peipei, Vondriska Thomas   Heart disease leaves its mark: proteomics-based biosignatures in acute coronary syndromes Journal of the American College of Cardiology, 2004; 44(8): 1584-6.
Doble Bradley W, Dang Xitong, Ping Peipei, Fandrich Robert R, Nickel Barbara E, Jin Yan, Cattini Peter A, Kardami Elissavet   Phosphorylation of serine 262 in the gap junction protein connexin-43 regulates DNA synthesis in cell-cell contact forming cardiomyocytes Journal of cell science, 2004; 117(Pt 3): 507-14.
Vondriska Thomas M, Pass Jason M, Ping Peipei   Scaffold proteins and assembly of multiprotein signaling complexes Journal of molecular and cellular cardiology, 2004; 37(2): 391-7.
Ping Peipei   A new chapter in cardiac PKC signaling studies: searching for isoform-specific molecular targets. Focus on: "isoenzyme-selective regulation of SERCA2 gene expression by protein kinase C in neonatal rat ventricular myocytes" American journal of physiology. Cell physiology, 2003; 285(1): C19-21.
Zhang Jun, Ping Peipei, Vondriska Thomas M, Tang Xian-Liang, Wang Guang-Wu, Cardwell Ernest M, Bolli Roberto   Cardioprotection involves activation of NF-kappa B via PKC-dependent tyrosine and serine phosphorylation of I kappa B-alpha American journal of physiology. Heart and circulatory physiology, 2003; 285(4): H1753-8.
Vondriska Thomas M, Ping Peipei   Multiprotein signaling complexes and regulation of cardiac phenotype Journal of molecular and cellular cardiology, 2003; 35(9): 1027-33.
Baines Christopher P, Song Chang-Xu, Zheng Yu-Ting, Wang Guang-Wu, Zhang Jun, Wang Ou-Li, Guo Yiru, Bolli Roberto, Cardwell Ernest M, Ping Peipei   Protein kinase Cepsilon interacts with and inhibits the permeability transition pore in cardiac mitochondria Circulation research, 2003; 92(8): 873-80.
Weiss James N, Korge Paavo, Honda Henry M, Ping Peipei   Role of the mitochondrial permeability transition in myocardial disease Circulation research, 2003; 93(4): 292-301.
Weiss JN, Korge P, Honda HM, Ping P   Role of the mitochondrial permeability transition in myocardial disease, Circ Res, 2003; 93(4): 292-301.
Ping P, Song C, Zhang J, Guo Y, Cao X, Li R, Vondriska TM, Pass JM, Tang XL, Pierce WM, Bolli R   Formation of PKCε-Lck signaling modules confers cardioprotection, J Clin Invest, 2002; 109(4): 499-507.
Ping Peipei, Song Changxu, Zhang Jun, Guo Yiru, Cao Xinan, Li Richard C X, Wu Wenjian, Vondriska Thomas M, Pass Jason M, Tang Xian-Liang, Pierce William M, Bolli Roberto   Formation of protein kinase C(epsilon)-Lck signaling modules confers cardioprotection The Journal of clinical investigation, 2002; 109(4): 499-507.
Baines CP, Zhang J, Wang GW, Zheng YT, Xiu JX, Cardwell EM, Bolli R, Ping P   Mitochondrial PKC and MAPK form signaling modules, Circ Res, 2002; 90(4): 390-397.
Edmondson RD, Vondriska TM, Biederman KJ, Zhang J, Jones RC, Pisano MR, Ping P   PKC complexes include metabolic-and translation-related proteins, Mol Cell Proteomics, 2002; 1(6): 421-433.
Ping P, Zhang J, Pierce W, Bolli R   Functional proteomic analysis of PKCε signaling complexes in the normal heart and during cardioprotection, Circ Res, 2001; 88(1): 59-62.
Ping P, Zhang J, Zheng YT, Li R, Dawn B, Takano H, Balafanova Z, Bolli R   Demonstration of PKCε-dependent activation of Src and Lck tyrosine kinases in preconditioning, Circ Res, 1999; 85(6): 542-50.
Ping P, Takano H, Zhang J, Tang XL, Qiu Y, Li R, Banerjee S, Dawn B, Bolli R   Isoform-selective activation of PKCε by nitric oxide in the heart of conscious rabbits, Circ Res, 1999; 84(5): 587-604.
Ping P, Qiu Y, Zhang J, Tang XL, Manchikalapudi S, Bolli R   Direct evidence for an essential role of PKC in the development of late preconditioning in rabbits, J Clin Invest, 1998; 101(10): 2182-2198.
Ping P, Gao M, Post S, Insel PA, Tang R, Hammond HK   Increased expression of adenylylcyclase type VI proportionately increases β-adrenergic receptor-stimulated cAMP in neonatal rat cardiac myocytes, Proc Natl Acad Sci USA, 1998; 95(3): 1038-1043.
Ping P, Zhang J, Qiu Y, Tang XL, Cao X, Bolli R   Ischemic preconditioning induces selective translocation of PKC isoform epsilon and eta in the heart of conscious rabbits, Circ Res, 1997; 81(3): 404-414.
Giordano F, Ping P, Mckirnan D, Nozaki S, DeMaria A, Dillmann W, Mathieu-Costello O, Hammond HK   Intracoronary gene transfer of fibroblast growth factor-5 increases blood flow and contractile function in an ischemic region of the heart, Nature Medicine, 1996; 2(5): 534-539.
Lam Maggie P Y, Lau Edward, Liem David A, Ping Peipei   Cyclophilin D and acetylation: a new link in cardiac signaling Circulation research, 2013; 113(12): 1268-9.
Cui Ziyou, Scruggs Sarah B, Gilda Jennifer E, Ping Peipei, Gomes Aldrin V   Regulation of cardiac proteasomes by ubiquitination, SUMOylation, and beyond Journal of molecular and cellular cardiology, 2014; 71: 32-42.
Lu Gang, Ota Asuka, Ren Shuxun, Franklin Sarah, Rau Christoph D, Ping Peipei, Lane Timothy F, Zhou Z Hong, Reue Karen, Lusis Aldons J, Vondriska Thomas, Wang Yibin   PPM1l encodes an inositol requiring-protein 1 (IRE1) specific phosphatase that regulates the functional outcome of the ER stress response Molecular metabolism, 2013; 2(4): 405-16.
Lam Maggie P Y, Wang Ding, Lau Edward, Liem David A, Kim Allen K, Ng Dominic C M, Liang Xiangbo, Bleakley Brian J, Liu Chenguang, Tabaraki Jason D, Cadeiras Martin, Wang Yibin, Deng Mario C, Ping Peipei   Protein kinetic signatures of the remodeling heart following isoproterenol stimulation The Journal of clinical investigation, 2014; 124(4): 1734-44.
X'avia Chan C Y, Wang Ding, Cadeiras Martin, Deng Mario C, Ping Peipei   S-nitrosylation of TRIM72 mends the broken heart: a molecular modifier-mediated cardioprotection Journal of molecular and cellular cardiology, 2014; 72: 292-5.
Liem David A, Nsair Ali, Setty Shaun P, Cadeiras Martin, Wang Ding, Maclellan Robb, Lotz Chris, Lin Amanda J, Tabaraki Jason, Li Hua, Ge Junbo, Odeberg Jacob, Ponten Fredrik, Larson Erik, Mulder Jan, Lundberg Emma, Weiss James N, Uhlen Mathias, Ping Peipei, Deng Mario C   Molecular- and organelle-based predictive paradigm underlying recovery by left ventricular assist device support Circulation. Heart failure, 2014; 7(2): 359-66.
Zong Nobel, Ping Peipei, Lau Edward, Choi Howard Jh, Ng Dominic Cm, Meyer David, Fang Caiyun, Li Haomin, Wang Ding, Zelaya Ivette M, Yates John R, Lam Maggie Py   Lysine Ubiquitination and Acetylation of Human Cardiac 20S Proteasomes Proteomics. Clinical applications, 2014; 72: .
Lotz Christopher, Lin Amanda J, Black Caitlin M, Zhang Jun, Lau Edward, Deng Ning, Wang Yueju, Zong Nobel C, Choi Jeong H, Xu Tao, Liem David A, Korge Paavo, Weiss James N, Hermjakob Henning, Yates John R, Apweiler Rolf, Ping Peipei   Characterization, design, and function of the mitochondrial proteome: from organs to organisms Journal of proteome research, 2014; 13(2): 433-46.
Wang Ding, Liem David A, Lau Edward, Ng Dominic Cm, Bleakley Brian J, Cadeiras Martin, Deng Mario C, Lam Maggie Py, Ping Peipei   Characterization of human plasma proteome dynamics using deuterium oxide Proteomics. Clinical applications, 2014; 72: .

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