John Novembre, Ph.D.


Work Titles
UCLA Assistant Professor, Ecology and Evolutionary Biology
Education:
Degrees:
Ph.D., University of California, Berkeley, 2006
B.A., The Colorado College, 1996 - 2000

Contact Information:

Work Email Address:

jnovembre@ucla.edu


Website:

Wb-Profile

Work Phone Number:

(310)825-4065

Work Address:

LIFE SCIENCE BLDG 4325


Detailed Biography:

My research lies at the interface of population genetics and computational statistics. Specifically, projects focus on developing and evaluating statistical methods for analyzing genomic-scale population genetic data. Much of this work investigates human evolutionary history using data from emerging genotyping and sequencing technologies, although other projects address evolutionary genetic questions in non-human, non-model organisms. One central area of current interest is in computational methods to study relatedness among populations and the applications these methods have for detecting natural selection, genome-wide association mapping, understanding population history, personal ancestry inference in humans, and conservation genetics. Most broadly, I am interested in how to decipher patterns of observed genetic variation to understand evolutionary, genomic, and ecological processes.

Publications:

A selected list of publications:

Yang Wen-Yun, Novembre John, Eskin Eleazar, Halperin Eran   A model-based approach for analysis of spatial structure in genetic data Nature genetics, 2012; 44(6): 725-31.
Novembre John, Han Eunjung   Human population structure and the adaptive response to pathogen-induced selection pressures Philosophical transactions of the Royal Society of London. Series B, Biological sciences, 2012; 367(1590): 878-86.
Fuller Trevon, Bensch Staffan, Müller Inge, Novembre John, Pérez-Tris Javier, Ricklefs Robert E, Smith Thomas B, Waldenström Jonas   The ecology of emerging infectious diseases in migratory birds: an assessment of the role of climate change and priorities for future research EcoHealth, 2012; 9(1): 80-8.
Veeramah Krishna R, Tönjes Anke, Kovacs Peter, Gross Arnd, Wegmann Daniel, Geary Patrick, Gasperikova Daniela, Klimes Iwar, Scholz Markus, Novembre John, Stumvoll Michael   Genetic variation in the Sorbs of eastern Germany in the context of broader European genetic diversity European journal of human genetics : EJHG, 2011; 19(9): 995-1001.
Novembre John, Ramachandran Sohini   Perspectives on human population structure at the cusp of the sequencing era Annual review of genomics and human genetics, 2011; 12(1): 245-74.
Wegmann Daniel, Kessner Darren E, Veeramah Krishna R, Mathias Rasika A, Nicolae Dan L, Yanek Lisa R, Sun Yan V, Torgerson Dara G, Rafaels Nicholas, Mosley Thomas, Becker Lewis C, Ruczinski Ingo, Beaty Terri H, Kardia Sharon L R, Meyers Deborah A, Barnes Kathleen C, Becker Diane M, Freimer Nelson B, Novembre John   Recombination rates in admixed individuals identified by ancestry-based inference Nature genetics, 2011; 43(9): 847-53.
vonHoldt Bridgett M, Pollinger John P, Earl Dent A, Knowles James C, Boyko Adam R, Parker Heidi, Geffen Eli, Pilot Malgorzata, Jedrzejewski Wlodzimierz, Jedrzejewska Bogumila, Sidorovich Vadim, Greco Claudia, Randi Ettore, Musiani Marco, Kays Roland, Bustamante Carlos D, Ostrander Elaine A, Novembre John, Wayne Robert K   A genome-wide perspective on the evolutionary history of enigmatic wolf-like canids Genome research, 2011; 21(8): 1294-305.
Vonholdt Bridgett M, Pollinger John P, Lohmueller Kirk E, Han Eunjung, Parker Heidi G, Quignon Pascale, Degenhardt Jeremiah D, Boyko Adam R, Earl Dent A, Auton Adam, Reynolds Andy, Bryc Kasia, Brisbin Abra, Knowles James C, Mosher Dana S, Spady Tyrone C, Elkahloun Abdel, Geffen Eli, Pilot Malgorzata, Jedrzejewski Wlodzimierz, Greco Claudia, Randi Ettore, Bannasch Danika, Wilton Alan, Shearman Jeremy, Musiani Marco, Cargill Michelle, Jones Paul G, Qian Zuwei, Huang Wei, Ding Zhao-Li, Zhang Ya-Ping, Bustamante Carlos D, Ostrander Elaine A, Novembre John, Wayne Robert K   Genome-wide SNP and haplotype analyses reveal a rich history underlying dog domestication Nature, 2010; 464(7290): 898-902.
Novembre John, Slatkin Montgomery   Likelihood-based inference in isolation-by-distance models using the spatial distribution of low-frequency alleles Evolution; international journal of organic evolution, 2009; 63(11): 2914-25.

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