Aragam Bryon and Zhou Qing Concave penalized estimation of sparse Gaussian Bayesian networks, Journal of Machine Learning Research, 2015; 16: 2273-2328.
Cha Maria, Zhou Qing Detecting clustering and ordering binding patterns among transcription factors via point process models Bioinformatics (Oxford, England), 2014; 30(16): 2263-71.
Zhou Qing Monte Carlo simulation for Lasso-type problems by estimator augmentation, Journal of the American Statistical Association, 2014; 109: 1495-1516.
Shen Shihao, Park Juw Won, Lu Zhi-xiang, Lin Lan, Henry Michael D, Wu Ying Nian, Zhou Qing, Xing Yi rMATS: robust and flexible detection of differential alternative splicing from replicate RNA-Seq data Proceedings of the National Academy of Sciences of the United States of America, 2014; 111(51): E5593-601.
Levinson Matthew, Zhou Qing A Penalized Bayesian Approach to Predicting Sparse Protein-DNA Binding Landscapes Bioinformatics (Oxford, England), 2013; 47(16): .
Lee Yuju, Zhou Qing Co-regulation in embryonic stem cells via context-dependent binding of transcription factors Bioinformatics (Oxford, England), 2013; 29(17): 2162-8.
Zhao Keyan, Lu Zhi-Xiang, Park Juw Won, Zhou Qing, Xing Yi GLiMMPS: Robust statistical model for regulatory variation of alternative splicing using RNA-seq data Genome biology, 2013; 14(7): R74.
Fu Fei and Zhou Qing Learning sparse causal Gaussian networks with experimental intervention: Regularization and coordinate descent, Journal of the American Statistical Association, 2013; 108: 288-300.
Tang Wei, Zhou Qing Finding multiple minimum-energy conformations of the hydrophobic-polar protein model via multidomain sampling Physical review. E, Statistical, nonlinear, and soft matter physics, 2012; 86(3 Pt 1): 031909.
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